| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0905 |
|---|
| Symbol | |
|---|
| ID | 4617111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 807153 |
|---|
| End bp | 807872 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639784003 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_930424 |
|---|
| Protein GI | 119872417 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1801] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATTTT TCGTCGGTAC TTGCGGATTT CCAAAATCTA GACGATACAT ATACAACACA
TTAGATGCGG TAGAACTACA AGATACTTTC TACAATATGC CAGACCCTGA GAAAATGGCG
AAGTTACGGG AAGAGGCGCC CGAGTTTCAC TTTACAGCTA AGGTGTTCCA AGGTATTACG
CATCCCCCAA ATAGCCCAAC TTTTAAGAGA ACGAGGGGGT TTAAACCCAC TGATAAACAT
GGCGTTTTAA AACCCACGAA AGAAAACCTA GAGCTGTGGC AACAGTTTGT AGACGCTATA
GCGCCGCTTA GGCCAGAGGT ACTTGTTGTT CAAACGCCAC CGAGTTTAAA ACCGGAGCCG
TATATCTACG ATTTCTTCGC CTCTATAGTT GGCAAGTGGA AAATTGCATG GGAGCCTAGG
GGAGAGACCT ATAAAGACCT AGCGCTTATA CAAAAAATAG CAGAATTAGG AGTTGTAATT
GCAGTAGATC CCCTAAAGAG AGATCCTATA CATGGACATT TTTACTATTT TCGGCTACAT
GGGCTCGGCA AGGGCGAGGT TAATTACCGG TATAAATACA GTTCTGAAGA TCTAGAGAGA
CTCGCTACCA TAGTGAGACG TTTAAGCGGA GAGAGCGTAT ACATAATGTT TAACAATGTA
TATATGTATG AAGACGCCGT AGAGTTTAAA CGCTTGTTGT ATCAACGGCA AAAAATTTAA
|
|---|
| Protein sequence | MQFFVGTCGF PKSRRYIYNT LDAVELQDTF YNMPDPEKMA KLREEAPEFH FTAKVFQGIT
HPPNSPTFKR TRGFKPTDKH GVLKPTKENL ELWQQFVDAI APLRPEVLVV QTPPSLKPEP
YIYDFFASIV GKWKIAWEPR GETYKDLALI QKIAELGVVI AVDPLKRDPI HGHFYYFRLH
GLGKGEVNYR YKYSSEDLER LATIVRRLSG ESVYIMFNNV YMYEDAVEFK RLLYQRQKI
|
|---|
| |