Gene Pisl_0903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0903 
Symbol 
ID4616470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp805032 
End bp805943 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content50% 
IMG OID639783999 
ProductABC transporter related 
Protein accessionYP_930422 
Protein GI119872415 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCG CTATTGGCGT CGGCATATAT AAAAGGTTTA TTACAAGAGA ACGTCTTGGC 
CTCCTTAGAA GTAGACGGAG GATAGTAGAG GCCTTGAGAG GGGTGGATAT AGCTGTAGAT
AGGGGGCGAC TTCTTTCTTT AGTGGGGCCG AACGGCGCTG GCAAAACCAC GTTGGTTCGT
ATATTTGCGA CTTTGTTAGT GCCTGACAGA GGTGAGGTGT ATATAGGCGG TTATGATGTA
GTTAAAGATG CCCATAGGGT AAGACGGATT ATAGGACTAA TGCTTTATCC AGACAAGGGC
TTCTTTGGCA GACTGTCCGG CTTGGAGAAT CTAGTGTACT ACGGAATGTT GTATGGCTTT
AGTAGAAGAG AGGCGCGCCG CCGCGCTCTT GAGCTTATTG AACTAGTGGG TCTTTGGGAA
GCGCGGGATA GGCCTTACGA GGAGTATAGC GCCGGGATGA AGGCGAGGCT AGGTCTTGCA
AAGGCGCTTA TAAATAACCC AGAGTTCCTA CTACTTGATG AGCCCACGGT GGGCATAGAC
CCCGTAGGCG CTAGGAAGAT AAGAGAGGTG ATAAAGAGCT TGAAGAATGA GGGAAGGGCT
GTGTTACTCA CTTCACACAA CCTCTACGAG GTCGAAGAGC TTTCTGACGA AGTTGCTGTG
ATTGTAGACG GTCGAATAAT AGCCAGGGGG ACTCCCATAG AACTTAAAAG CCGCTTGGGC
TTCCGACCTG TAGCTGTCGT AAAGGCGATT TGCAACGGCG AAGAGAGAAT TTTCATTAGA
GACAGCGCTG GCGGAAGAGA GCTTGGGATC CTCATAAGGG AGGTTCTCGA TGAAGGTTGC
GAAGTAGTAG AGGCAAGAGT TCATGAGCCT CCTCTAGAGG AGGTCTTGGT AAAGACATTG
GGTGGGGCAT GA
 
Protein sequence
MSFAIGVGIY KRFITRERLG LLRSRRRIVE ALRGVDIAVD RGRLLSLVGP NGAGKTTLVR 
IFATLLVPDR GEVYIGGYDV VKDAHRVRRI IGLMLYPDKG FFGRLSGLEN LVYYGMLYGF
SRREARRRAL ELIELVGLWE ARDRPYEEYS AGMKARLGLA KALINNPEFL LLDEPTVGID
PVGARKIREV IKSLKNEGRA VLLTSHNLYE VEELSDEVAV IVDGRIIARG TPIELKSRLG
FRPVAVVKAI CNGEERIFIR DSAGGRELGI LIREVLDEGC EVVEARVHEP PLEEVLVKTL
GGA