Gene Pisl_0902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0902 
Symbol 
ID4616472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp804271 
End bp805035 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content51% 
IMG OID639783998 
ProductABC-2 type transporter 
Protein accessionYP_930421 
Protein GI119872414 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCCG GCTTATATCT AGCGGTTAGG CTCTACCTCC GTCTCTACGC GCTGTCTCTC 
TCAGTTTCTC TGCTTATGCC TTTTTTCGCC TTGTTATTCT ACGCCGCAGG CTGGGTAGTG
TCAAGGGGGA AGGCGGACAT TGAGAAGTTC GTGTATCAGC TTGTCGGCGT TGTGATAGCG
GTAATTGCAC AGATAGCCAC AAGTGAAGCG CTTTGGGATT TGTATATCTT TATGTCCGGC
GGCCAACTGG AGTATTTAAT AGCTTCGCCA TCCTATCCTC TGGCGGTGTT AATGGCCTTC
TATGTCACAC AGTTTATGTT TTTTGGGCTG GGGGTTGCAG TAACTGCAGC TGTTGTTTTG
GCTGTGATTA AAGGGCCTGT ATACGCCGCC GCCATGACTC TTGCAGTGTT GACAGCAGCA
ATCTTCTCAC TGCCACTTCT CGGGATCGCC TTAGCGCTGA CGTATCTACT GCCATATGTA
CGGAACCCTG GCCCCCTCTC TTCAGTTTTG AATGCCGCTG TGATGTTTTT CGGCGGCGCG
TTATATCCAG CGTCTATCCT CCCGGGGGCG CTCCAAGCTA TATCTCATCT ACTTCCCTTC
GCCACTTGGG CCGAGGCCGT TAGATCTTTA GCGCTGGCCC TTGAATTGCC TATACGTCTC
CTCGGCCCAT TGTTAGGCTA TATGGCCTAC TTTGCACTAG GAGTCGTCGT GTGGAACTTC
TACGTCAGAA GTCTTCAGAG GTCTGGGCGT TACCATGTTT GGTAG
 
Protein sequence
MRAGLYLAVR LYLRLYALSL SVSLLMPFFA LLFYAAGWVV SRGKADIEKF VYQLVGVVIA 
VIAQIATSEA LWDLYIFMSG GQLEYLIASP SYPLAVLMAF YVTQFMFFGL GVAVTAAVVL
AVIKGPVYAA AMTLAVLTAA IFSLPLLGIA LALTYLLPYV RNPGPLSSVL NAAVMFFGGA
LYPASILPGA LQAISHLLPF ATWAEAVRSL ALALELPIRL LGPLLGYMAY FALGVVVWNF
YVRSLQRSGR YHVW