| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0852 |
|---|
| Symbol | |
|---|
| ID | 4617886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | + |
|---|
| Start bp | 763431 |
|---|
| End bp | 764480 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639783948 |
|---|
| Product | DNA primase large subunit |
|---|
| Protein accession | YP_930371 |
|---|
| Protein GI | 119872364 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2219] Eukaryotic-type DNA primase, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.10596 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTTGTA ATATTTCCAT AAGCGAATCG GCATGCTATT TCCCATTTCT TAACAGATCT
ATGGCCTATC TCTCTAGAAG AGGTTTCTCT TTAGATTTCG TACTTACAAA TAGCGCTTTT
ATTGAGAAGG CAATAGAGCG GTTTAAAAAA TCGCTAGGAC GCGAACCGTT TAACCCCCGC
CAGTGTTTAG ACACACCAGA GAATATAGCT GTAGCTGCTA GGTTAGCTTT ATATATCGCA
GCTGCTACAA AAAATACGTA TATATTACGA AGGTTTATAG ATTCAGAAAG TAAAAACTTT
ACAATATTGT TGAGAAAGAT ACCAGGAGTA CAAGATCCTA GATGTAAGAT AGAGATAGCT
AAAGACTTGG GCATATATGC AAAACAAGCA AGTGAAGTTG TCTCAGGCGC TATAGTAGCT
GTATATAACC TACCCATGGC TGTTAGATGG GTATCTTACC TCAGATATGC ACCGCAGGAT
CCCTACTGGG CTATGATAAA TAGGCCGGTG ATTAAAGGCT GGGTTATTTT ACCTATGGAG
GACTTTGAAA GACTCCTTGA GGAGGCTTAT GAAGAACGCA TGTTACAAAT TGTGAGAGAA
AACGAACTAG CTGTAGGTAG AATCGCTACA GCAGTCGACA TGACACAGCT TGAGGACGTA
ATTAAAAAGT ATGCCCAAAG ACCCGTACAG CTGTCTTACC AACAAACAGA GGGGAAAGAT
CCTCCATGTA TGCAAGCAAT AATAACTGCG CTTAAAAATG GCGAAAATCT TCCTCATACA
GCAAGATTTG CTATAACGAC GTATTTAATT AAGAGAGGGT GGGATTTAGA ACAGATAGTT
GAGTTATTTC GCTCATCTCC TGACTTTAAC GAAAAAATTA CGCGGTATCA GGTAATGCAC
ATAGCCGGCC AAGTTGGAGG GCGAAAGGAA TATGCAGTAC CTAGTTGTGA AACTATGCAT
ACGTGGGGGC TTTGTCCAAC AAACCTTGGT TGTGGGGTGA AAAACCCGCT TCAATATGGA
CGTAAATCTA TAATTAAGAA GAGTCCATAA
|
|---|
| Protein sequence | MSCNISISES ACYFPFLNRS MAYLSRRGFS LDFVLTNSAF IEKAIERFKK SLGREPFNPR
QCLDTPENIA VAARLALYIA AATKNTYILR RFIDSESKNF TILLRKIPGV QDPRCKIEIA
KDLGIYAKQA SEVVSGAIVA VYNLPMAVRW VSYLRYAPQD PYWAMINRPV IKGWVILPME
DFERLLEEAY EERMLQIVRE NELAVGRIAT AVDMTQLEDV IKKYAQRPVQ LSYQQTEGKD
PPCMQAIITA LKNGENLPHT ARFAITTYLI KRGWDLEQIV ELFRSSPDFN EKITRYQVMH
IAGQVGGRKE YAVPSCETMH TWGLCPTNLG CGVKNPLQYG RKSIIKKSP
|
|---|
| |