Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0840 |
Symbol | |
ID | 4616586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 752645 |
End bp | 753565 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639783936 |
Product | hypothetical protein |
Protein accession | YP_930359 |
Protein GI | 119872352 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.192985 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.103664 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTAGATT ACGTAGAAGT AGGAATTGGA GATTCAAAAG CCTCGGTTAG ACTCGTAGAT GTAACTTTCG TCACAGGAGT GGGGAAATCG ACATTTCTTG AGGTGTTGTA TAGAGTAATT TCAAATATTG GTAAAAAGAT ACCTAAGATA AGAGAAAGTT GGAGCTTTTA TGCTCAAAGT GGAGACATCT CCTATTCAAT AGTTGTTAAC AAATGGAGAG TTAGACAAAC TATATCTGTA AAGGGAGAGG ATATAGTATT TGAATATATT CCGTCAAAGC CCCTACATAG GTTAATAAAG CCTATAGAAG TAACTATCGC GGAGGCAGAT GTCATAATCC CCAATATTAA AACGGAGGAA CACCTATCTA TTGTAGCTGA GGAGGATATA AATAGATTCA ACAGTCTCCT GGCCACGGCC AGGAAGAGCT TAGGCATTAA AATACAGATG TTAGGGCCCT ACATAAGCCC CAAATCTCTC GTAGACGCTA ATGCACGCGT AAATACGCTA GATCGCTATG CCAGGAATTT GGCAGGAGTT TTATCATATT TAGCTCTTTA TAGACCATCT GCATACGACT CTATAAGGGC TAGTCTCAAG AGAGTGGGGG TTTCTCTCTC AGTAGGCTTG GCCAAACCTG GTAAAATAGG CGCATTTGTT ATCTCTAAGG GCTTAAAAAT GCCTTTATCT AAAGCGCCAT GTTCTATAAA AAGTCTGCTT GCTCTTACTA CAGCATTAGA AATTAAACCG AATATCTTGT TAATAGATAA TTTTGACTAC TGTATGACGC GTAAAACTGC AGAAACTATA GCAATGTTAC TTAGACAAAA ACCTACAAGA GTTGTAGCAG AAATACACAA TGAGGGAATT GTAGATTGGT TCGATATTCC CAACAAATCT GTTGTAGAGG TAATGTTATG A
|
Protein sequence | MVDYVEVGIG DSKASVRLVD VTFVTGVGKS TFLEVLYRVI SNIGKKIPKI RESWSFYAQS GDISYSIVVN KWRVRQTISV KGEDIVFEYI PSKPLHRLIK PIEVTIAEAD VIIPNIKTEE HLSIVAEEDI NRFNSLLATA RKSLGIKIQM LGPYISPKSL VDANARVNTL DRYARNLAGV LSYLALYRPS AYDSIRASLK RVGVSLSVGL AKPGKIGAFV ISKGLKMPLS KAPCSIKSLL ALTTALEIKP NILLIDNFDY CMTRKTAETI AMLLRQKPTR VVAEIHNEGI VDWFDIPNKS VVEVML
|
| |