| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0838 |
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| Symbol | |
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| ID | 4618063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | - |
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| Start bp | 750993 |
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| End bp | 751691 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639783934 |
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| Product | putative RNA-associated protein |
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| Protein accession | YP_930357 |
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| Protein GI | 119872350 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1500] Predicted exosome subunit |
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| TIGRFAM ID | [TIGR00291] rRNA metabolism protein, SBDS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.616695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.124761 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGAAGA AGGTGGCGGT TGCAAAACTT GACAGAGGCG GCGAGCATTT TGAAATCCTA
GTAGACCCAG ATGCCGCGCT AGAGCTAAAG TTGGGGAAGT CCCTGGGGAT AGATAAAATA
CTTGTCCACG AGGAGATATA CAAAGACGCA AAAAAAGGTC TTCGCGCGTC GGAGCAGTCT
TTGAAAAAAG TTTTTGGCAC TACCGATATA AGAAAAATCG CTGAGATTAT CATAAAGGAA
GGTGAAATAC CTCTTACGGC GGAGCAGAGG AGGAAACTTA TTGAAGATAA GAAGAGACAG
ATTATCGAGT GGATTTCACG CAATTGTATT GATGTTAGGA CGAGGACTCC TGTGCCTCCT
CAGAGAGTTG AAAACGCTAT AGAACAAGCC AGAGTGTCTA TAGATCCTTT CAAACCAGCT
GAGGAGCAAG TACAGGAGAT TTTAAAAGAG ATCCAGAGGA TTATCCCTAT TAAGATAGCT
ACTGCACGTA TTTCTCTTTC CGTTTCGTCT ACTTATGCCC AAAGAGTAAA GGGTTTGGTT
GTAAAAATGG CGAAGATAGT AAACGAGAGA TATAGACCAG ATGGATCATG GGAAGCTGTA
TTGGAGTTGC CGGCAGGTCT ACAAGATGCG TTAATTTCTA AAGTCAATGA TATTACTCAT
GGTGATGCCG ATATTAGAAT ACTAGAAATT GTGTACTAA
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| Protein sequence | MTKKVAVAKL DRGGEHFEIL VDPDAALELK LGKSLGIDKI LVHEEIYKDA KKGLRASEQS
LKKVFGTTDI RKIAEIIIKE GEIPLTAEQR RKLIEDKKRQ IIEWISRNCI DVRTRTPVPP
QRVENAIEQA RVSIDPFKPA EEQVQEILKE IQRIIPIKIA TARISLSVSS TYAQRVKGLV
VKMAKIVNER YRPDGSWEAV LELPAGLQDA LISKVNDITH GDADIRILEI VY
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