| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0835 |
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| Symbol | |
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| ID | 4616502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | - |
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| Start bp | 748690 |
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| End bp | 749514 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639783931 |
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| Product | exosome complex RNA-binding protein Rrp42 |
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| Protein accession | YP_930354 |
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| Protein GI | 119872347 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2123] RNase PH-related exoribonuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.127977 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCTA TTTCACCATA TGGAAAACGC TTTATCTCCT ATCTAAGAAA AGAACAGATT
AGGAAACTGT TAGCGACTAA ATATAGAATA GATGGGAGAG AACCCGAGAG AATTAGAAAT
ATCGAAATTA AGACTAGTGT TATTAAAACA GCAGATGGCT CTGCCGAAGT AAAACTTGGA
AAAACACATG TTGTAGCTGG CGTCAAAGTG AGTCTTGGAC AACCGTTTCC AGACGCACCA
GATGAGGGTG TGTTAGTAGT AAATGCAGAA GTTTTGCCTC ATGCATCGCC TTATACTGAG
GTGGGCCCCC CTGATGAGTT TGCAATAGAG CTTGCCAGAG TAATTGACCG CGGTATTAGA
CATTGTGGCT ATGTAGATTT CAAGAAATTG GTCGTAGAGG GAGGTAAAGC GTATGTTCTC
TGGGTTGACC TTTATGTTAT TAACGACGAT GGAAATTTAA TAGATGCGGC AAATCTTGCC
GCCGTTGCTG CATTAAAAGA TACTCAACTA CCTGTAGTCG TGAAAGACGA ACAAGGTGTA
AAACTAGATC GCAATAATAA AACGCCTTTA CCTATTGAGG TAAGTAAGGC CCCTATTGCG
GTCTCAGTTG GTAAAATAGG AGGGGTCCTG TTTCTAGACC CAACTTTTGA AGAGGAGTTA
AGCTTAGATG GGCGGATTAC ATTTACAATA TCGGAGGATC GTATAGTGGC TGTTCAGAAG
ACAATAGGGA CGTTTACTTC GCAAGAACTA GAGATGGCGT TAGAGTTAGC TTGGAAAGGC
AAAGAGCAAC TTATTACAGC AGCGAGAGGG GTCTTAGGGG TGTAG
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| Protein sequence | MASISPYGKR FISYLRKEQI RKLLATKYRI DGREPERIRN IEIKTSVIKT ADGSAEVKLG
KTHVVAGVKV SLGQPFPDAP DEGVLVVNAE VLPHASPYTE VGPPDEFAIE LARVIDRGIR
HCGYVDFKKL VVEGGKAYVL WVDLYVINDD GNLIDAANLA AVAALKDTQL PVVVKDEQGV
KLDRNNKTPL PIEVSKAPIA VSVGKIGGVL FLDPTFEEEL SLDGRITFTI SEDRIVAVQK
TIGTFTSQEL EMALELAWKG KEQLITAARG VLGV
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