| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0822 |
|---|
| Symbol | |
|---|
| ID | 4616670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 738970 |
|---|
| End bp | 740436 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639783917 |
|---|
| Product | prolyl-tRNA synthetase |
|---|
| Protein accession | YP_930341 |
|---|
| Protein GI | 119872334 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0442] Prolyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00408] prolyl-tRNA synthetase, family I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.62191 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.0638308 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTTT TAAGAGAGGC TAAACCATAT ACAAAGGATA AACTTAAAAC AAATTTAATA
GAATGGTTCC ATTGGCTTTT AAGAGAAGCG GAGCTGTATG ATGTAAGATA TCCGGTTAAG
GGGGCTTACG TATGGCGTCC TTATGGTATG AAATTAAGGC GTAACGTGGA GAACTTGATA
AGGCGTATTC ACGATGAAAC AGGACACGAA GAAGTGCTAT TTCCTGTTTT TATACCCTAT
GAGTTTTTCA GCAAAGAGTC GCAACACATA AGAGGATTTG AAAAGGAGGT TTTTTGGGTT
TCAAAAGGCG GCGAAGGTGG CGAGAGATTA ATCCTGAGGC CCACCTCAGA AACTGCAATT
ATGCCTATGG TGAAGCTATG GATACAAGAC TATAAAGATC TACCTCTCCG GTTGTATCAA
ATAGTTAGTG TATTTAGAGC GGAAACAAAA ATGACACACC CCATGATTCG CCTAAGGGAG
ATTAGCATGT TTAAAGAGGC TCATACTGTA CACGCAACTA GAGAAGATGC CGAGAGACAG
ATTCGGGAGG CTGTGGAGAT CTATAAGAGG ATTTTTGACG AAATGTGTCT AGCATATATG
ATAAATAAGA GACCCAACTG GGATAAATTT GCTGGTGCTG AATATACAAT AGCATTTGAC
ACTATTCTGC CTGATGGTAG AACTTTGCAA ATAGGCACTG TACATTACCT TGGCGTAAAC
TTTACCAAAG TTTTCGAAGT TACGTATCTA GATATAGATG GCACGAGAAA GCTTGCCCAC
ACAACCTCCT ACGGTATTTC AGAGAGAAGT ATTGCCGCTA TGCTTATAAC ACATGGCGAC
GATGGAGGTA CTACATTGCC TCCAAAATTG GCGCCTATAC AAGTAGTTAT AGTGCCTATA
TTCTACGGAG AAGAAGAGAT GCCAACGGTT ATGAAATTTG TAGACGAAGT ATACAGGATG
TTGAGAGACG TAGGTATCCG TATACATATT GACGATAGAC GAGATAAAAC ACCTGGATGG
AAGTTTTACT ACTGGGAGTT AAAAGGTGTG CCTTTACGCA TAGAGGTCGG TAGGCGGGAT
ATAGAAAAGA GACAAGTTGT TGTAACCAGG AGAGATACGC TAGAGAAATA CGCCGTATCG
CTTGGAGAGC TGGTAGATGC GGTCAAACAA CTTATGAGCG TCGTAGAAGA CAATTTACGA
AAGAGGGCTT GGGAAGATCT AAGAAATAGA TTAGTTAAAG TGGAGAAAGT CGAAGATGCA
AAAAACGCCA TTAGAGAGGG CAAGGTTGTA GAAGTCCCCT GGAGTGGTGA CGATGAGTGT
GGAGTTAAGT TGCAAGAGCT CGTAGGTGCG GATGCGCTCG GCATTCCTAT GGATACAGAC
CCCTCAATAG GCGGTTTTGA TATGCGTGAC CTAGCATGTA AAGAAAAACG TGCCGAGTTT
TGGCTTAGAC TTTCGGAGCG GTACTAG
|
|---|
| Protein sequence | MELLREAKPY TKDKLKTNLI EWFHWLLREA ELYDVRYPVK GAYVWRPYGM KLRRNVENLI
RRIHDETGHE EVLFPVFIPY EFFSKESQHI RGFEKEVFWV SKGGEGGERL ILRPTSETAI
MPMVKLWIQD YKDLPLRLYQ IVSVFRAETK MTHPMIRLRE ISMFKEAHTV HATREDAERQ
IREAVEIYKR IFDEMCLAYM INKRPNWDKF AGAEYTIAFD TILPDGRTLQ IGTVHYLGVN
FTKVFEVTYL DIDGTRKLAH TTSYGISERS IAAMLITHGD DGGTTLPPKL APIQVVIVPI
FYGEEEMPTV MKFVDEVYRM LRDVGIRIHI DDRRDKTPGW KFYYWELKGV PLRIEVGRRD
IEKRQVVVTR RDTLEKYAVS LGELVDAVKQ LMSVVEDNLR KRAWEDLRNR LVKVEKVEDA
KNAIREGKVV EVPWSGDDEC GVKLQELVGA DALGIPMDTD PSIGGFDMRD LACKEKRAEF
WLRLSERY
|
|---|
| |