Gene Pisl_0820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0820 
Symbol 
ID4616582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp737426 
End bp737722 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content43% 
IMG OID639783915 
Product30S ribosomal protein S26e 
Protein accessionYP_930339 
Protein GI119872332 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG4830] Ribosomal protein S26 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.820029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.037836 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTAAAA AGAGGAAAAA TAGAGGTCGT AAAAAGGGCG ATAAGGGACG GGAGCCATAT 
GTATATTGTG ATAACTGTGG GAAAATTATG CCGAGATCTA AAGCCGTTAG ATTAACAGTT
CCTTACTCCC CTGTGCCGCC AGACTTAGCC AGAGAATTGG AAAAACAGGG CGCGATAATC
CCACGTTATC TAGTTACCAA GACTTACTGC ATTAACTGCG CAGTGTTCTT TGGTATAATC
AAGGTAAGAC CTCGAGAGGA GAGAAAGAAA AAAGTGCCAT TACAACAGGT CATTTGA
 
Protein sequence
MPKKRKNRGR KKGDKGREPY VYCDNCGKIM PRSKAVRLTV PYSPVPPDLA RELEKQGAII 
PRYLVTKTYC INCAVFFGII KVRPREERKK KVPLQQVI