Gene Pisl_0803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0803 
Symbol 
ID4617985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp724505 
End bp725218 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content43% 
IMG OID639783898 
Productmetal-dependent hydrolase 
Protein accessionYP_930322 
Protein GI119872315 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.000737495 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGAAATT TTATTAATTC GGGACTTGTA CGCTATATGC AAATTAGATG GTTCGGTCAT 
GCCGCGTTTA TACTAGAAAG CGGTAGTTTA AAGATATTAA TTGACCCATG GATCTCCAAT
CCTCTTTCGC CGGTTTCGCT ACAAGACGTA AAAAATCTAA AGCCAACCCA TATATTGGTT
ACACACGATC ATTTTGATCA TTTAGGCGAT GCCATAGATA TAAGTAAAGC TACTGGAGCG
CCTATTGTTG GCACCTATGA GCTAACGCTT GAGGTGGCTG AGAAGGGTAT ACCCGAGGCT
CAAACTCTGC CTATGAACAT CGGCGGTACT ATTAAGTTAG GCGATGGCGT AGAGATATAT
ATGACTCAAG CTTTACATAC AGCAAATAGA GGCGCACCGT CTGGTTTTGT AATAGCAACG
CCTGAGGGCA CTGTTTATCA TGCCGGCGAC ACAGGGCTTT TTAAAGATAT GGAACTTATA
GCAGAGTTGT ACGACATAGA CGTGGCTTTA TTGCCGATTG GAAGTGTTTT CACCATGGGG
CCGCGTGAAG CCGCAATAGC CGTACAGTTG TTAAGACCTA AAAAAGTTGT GCCGATGCAT
TATAATACAT TCCCACTTAT AAAACAAGAT CCCGAAGATT TCAAATCGCG GGTAGAAGCT
ATTTCACGTG TAAAAGTCTA TCTAATGAAG CCAGGAGATA CGCTCAGGAT ATAG
 
Protein sequence
MRNFINSGLV RYMQIRWFGH AAFILESGSL KILIDPWISN PLSPVSLQDV KNLKPTHILV 
THDHFDHLGD AIDISKATGA PIVGTYELTL EVAEKGIPEA QTLPMNIGGT IKLGDGVEIY
MTQALHTANR GAPSGFVIAT PEGTVYHAGD TGLFKDMELI AELYDIDVAL LPIGSVFTMG
PREAAIAVQL LRPKKVVPMH YNTFPLIKQD PEDFKSRVEA ISRVKVYLMK PGDTLRI