Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0803 |
Symbol | |
ID | 4617985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 724505 |
End bp | 725218 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639783898 |
Product | metal-dependent hydrolase |
Protein accession | YP_930322 |
Protein GI | 119872315 |
COG category | [R] General function prediction only |
COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.000737495 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGAAATT TTATTAATTC GGGACTTGTA CGCTATATGC AAATTAGATG GTTCGGTCAT GCCGCGTTTA TACTAGAAAG CGGTAGTTTA AAGATATTAA TTGACCCATG GATCTCCAAT CCTCTTTCGC CGGTTTCGCT ACAAGACGTA AAAAATCTAA AGCCAACCCA TATATTGGTT ACACACGATC ATTTTGATCA TTTAGGCGAT GCCATAGATA TAAGTAAAGC TACTGGAGCG CCTATTGTTG GCACCTATGA GCTAACGCTT GAGGTGGCTG AGAAGGGTAT ACCCGAGGCT CAAACTCTGC CTATGAACAT CGGCGGTACT ATTAAGTTAG GCGATGGCGT AGAGATATAT ATGACTCAAG CTTTACATAC AGCAAATAGA GGCGCACCGT CTGGTTTTGT AATAGCAACG CCTGAGGGCA CTGTTTATCA TGCCGGCGAC ACAGGGCTTT TTAAAGATAT GGAACTTATA GCAGAGTTGT ACGACATAGA CGTGGCTTTA TTGCCGATTG GAAGTGTTTT CACCATGGGG CCGCGTGAAG CCGCAATAGC CGTACAGTTG TTAAGACCTA AAAAAGTTGT GCCGATGCAT TATAATACAT TCCCACTTAT AAAACAAGAT CCCGAAGATT TCAAATCGCG GGTAGAAGCT ATTTCACGTG TAAAAGTCTA TCTAATGAAG CCAGGAGATA CGCTCAGGAT ATAG
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Protein sequence | MRNFINSGLV RYMQIRWFGH AAFILESGSL KILIDPWISN PLSPVSLQDV KNLKPTHILV THDHFDHLGD AIDISKATGA PIVGTYELTL EVAEKGIPEA QTLPMNIGGT IKLGDGVEIY MTQALHTANR GAPSGFVIAT PEGTVYHAGD TGLFKDMELI AELYDIDVAL LPIGSVFTMG PREAAIAVQL LRPKKVVPMH YNTFPLIKQD PEDFKSRVEA ISRVKVYLMK PGDTLRI
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