Gene Pisl_0794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0794 
Symbol 
ID4617092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp716373 
End bp718034 
Gene Length1662 bp 
Protein Length553 aa 
Translation table11 
GC content48% 
IMG OID639783889 
Productpeptidase S16, lon domain-containing protein 
Protein accessionYP_930313 
Protein GI119872306 
COG category[R] General function prediction only 
COG ID[COG1750] Archaeal serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0000691143 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGAAAGG CATTTGTGCT AGCTTTAATC GCCACAGCGC TTACGCTGGC TTTATGGCAA 
GCTTACACCG TAAGGATCGC CTCAGTGGAG ATCAATGCCT TAGCAGTAGG GCCCTCTGGG
GGCGCCGTTT TGCCCATAAG GGTCACACTT CTGACGCCAG GCGACGGGAG GGCCTATGTG
GCGGGAGTTC CCGAAGCAGG ACAGGGATTT GGCCCGTCTG CTCAAATAGC CCTATATGTT
GCAGCTCGAT ACTCTGGCAA GCCATATATA AATTATACAG CTCTATTGAG AGTGCTCGCA
AGCGATGCAC AAGTAGGCGG CCCCTCGGCC AGCGGCTATA TTACTGTGGC TATGTTTGCC
CTCATGAATG GTCTACAGCT TAGAAACGAC ACGGCTATGA CTGGTATAAT ACTACCCGAC
GGGCTAATCG GCCCCGTGGG CGGCGTTTCA CAAAAGGTCG CCGCAGCGGC GGAGAGAGGA
ATAAAGACCG TTCTCGTTCC AATTGGCGAA AAGCCAAGTG GCATACGTGG CATCAGAGTG
ATAGAGGTAG GAACTGTAGA AGAGGCCATA TATTACCTAA CTGGTTATAG AGTTGAAACA
CCACGGTCGT CGGTGGTAGA TGACACAATG TTTAGAGAGA TATCTAAAAA CCTCTTTGAT
GCAGTATACC GATATTACAA CCAGACAGTA GGTAGGGGGT ATGTAGACAC ATCCCTAATA
GAAGAGTTAA AGGCTAAAGG CGACTACTAC ACAGCAGCAT CGTTAATATA CCAAGGCATT
GTGAATTACT ACAGCGACCA AGCCGCCTCC TCTAGGAGGA TGGCTCGAAC ACTTTATGAT
CAAGCTCTCC AGCTAGCTAA AGAGGCCGAG AGGGAGCTTT CTAAAATCCC CATAACTATT
AACAACATAG ATCTCGTAGT AGCGGCGTAC ACCAGAATAT ATGAGGTATA TCTACAGGCT
AACTCAACGT CGCCTCAACC AGGTGTTATG TATGCCCGCG CAGTCACGCT AAAGCCGTGG
ATTGAGGAAG CTCGTAAAAT GGCCTACGGT CCTGCTGTAA ATGAGAGTGG ATTAGCAGAG
GCGGCCAGGA TGTATCTAGA CTACGCCAAA GCTATGTATG CGTATTTAGA GACGACATAT
GGCGTCACTA TTGGCGATTA TTCAACCGCC GTACAGCTCG CCGAAGATCT TTACGGCAAG
AGACTATATC TCGCGTCTAT GGCTAACTCT ATAGAGATCA TTGCCGAATC TGCCGCCGCT
CTCATGGCAT CTGCGTCAGA CAAGTATCTT TCTATAGCAA AAGACAGGGC GTTAATAAAT
ATGGCGCGTG CTGCGCGGTG CGGCTATACA AACACACTGC CTCTCAGCTA TCTCCAATTT
GGCGATTATT ACAGCCAGCA ACCAACTAGA ACGCAAAACG CCTTGACCTA CTATATTATG
GCATCTGTAT ATTCGACAGC CATGGGGGAC GTCGCTTGTA CCTCAAAGAG CGAAGTGGTA
TATCAACGCC CGACTTTCTC AGCGTCTGAA AGCAAAAATA TAACTGCTTC AACTATATAT
ACAGCAAGTA CTAGAGAAGA TGTAGAGGGG AAAAGTCTCT GGCTACCTCT CGTATTAGCA
CTATTGGCCG CTTTAGCTCT AGTCTACTCC TCTAGACGGT AA
 
Protein sequence
MRKAFVLALI ATALTLALWQ AYTVRIASVE INALAVGPSG GAVLPIRVTL LTPGDGRAYV 
AGVPEAGQGF GPSAQIALYV AARYSGKPYI NYTALLRVLA SDAQVGGPSA SGYITVAMFA
LMNGLQLRND TAMTGIILPD GLIGPVGGVS QKVAAAAERG IKTVLVPIGE KPSGIRGIRV
IEVGTVEEAI YYLTGYRVET PRSSVVDDTM FREISKNLFD AVYRYYNQTV GRGYVDTSLI
EELKAKGDYY TAASLIYQGI VNYYSDQAAS SRRMARTLYD QALQLAKEAE RELSKIPITI
NNIDLVVAAY TRIYEVYLQA NSTSPQPGVM YARAVTLKPW IEEARKMAYG PAVNESGLAE
AARMYLDYAK AMYAYLETTY GVTIGDYSTA VQLAEDLYGK RLYLASMANS IEIIAESAAA
LMASASDKYL SIAKDRALIN MARAARCGYT NTLPLSYLQF GDYYSQQPTR TQNALTYYIM
ASVYSTAMGD VACTSKSEVV YQRPTFSASE SKNITASTIY TASTREDVEG KSLWLPLVLA
LLAALALVYS SRR