Gene Pisl_0784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0784 
Symbol 
ID4616611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp709263 
End bp710228 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content43% 
IMG OID639783878 
Productglycosyl transferase family protein 
Protein accessionYP_930303 
Protein GI119872296 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0954462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0132402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAATTG AAACTCTCTC CATAGCTATC ACATTTGTCA TAGGTGTTCT TTTTGGCAAC 
TGGTGGATCT CTTACCAGAG GAAGATAGGG CTGACGTCGC GAGATATCTA CAAAGGTATC
GACGGCGTCC CTCGCGCCGG CGGCCTTATC GCTATGGTTT CCGCCGTCTC TGGCTACATG
ATAGTTTTAC CCCAATCTAG AGATGTGTTG CCCCTACTCA TTATCATAAT ACTCACAGGC
ATATTAGGCC TTTTAGACGA TATAAAAGGA GTTAGTGAAT ATGTAAGAGT GTTTGTTCCC
TTCTTTCTAG CATTGATGTT GGCACGGGCT TTAGAGAATA AACTAAGGTT AACTATGCCG
TTTATAGGGC TTTTCTACGG CGCCACTGGG TGGCTAGCTG TATTAGCTAT ACCTATTTTG
ACAAATGCCT TTAATATGCT AGACCCTGTT AATGGCTTTC TTCCAGTTGC AAATATAGTA
ATTGGGAGTA CTCTAGCCAT TATTTCTATT ATCAGAGGAC AGATAGAGGC TGTCTCTTTA
TATGCAGTAC ATGTGGCAGC CTCTGCCGCA TTGTATTTCT ATAACCGCTA TCCCGCCAAG
ACATTCAATG GTAATGTGGG TAGCTATTTT TTGGGGGCCA ATTTGTCAAC TCTAGCCGTG
ATATATGACA TGGTTCCCTA CCTAATTTTG GCAGCCCTCC CCTTTGTGGT AAATGGGGCG
TTAATTATAT TCTCTTCAGG AGGTATCAGA AGGCGTGAGA AGATACAAAG GCCGACCATG
CTCGTTAACG GCATAGTTTC GCAAGACTGC TCTTCGCCCA TAATATCGCT AGTGAGGTTA
ATAGTAGCCG ATAGGCCTAT GACGGAATAT GATATATTCA AATCTCTCGT TTTAATAACT
AGCGTAACTT CAGCGTTAAC ATTGATACTT GTCGTGGTTA TTAAGGCGTT ACAACTTCCC
ATATGA
 
Protein sequence
MLIETLSIAI TFVIGVLFGN WWISYQRKIG LTSRDIYKGI DGVPRAGGLI AMVSAVSGYM 
IVLPQSRDVL PLLIIIILTG ILGLLDDIKG VSEYVRVFVP FFLALMLARA LENKLRLTMP
FIGLFYGATG WLAVLAIPIL TNAFNMLDPV NGFLPVANIV IGSTLAIISI IRGQIEAVSL
YAVHVAASAA LYFYNRYPAK TFNGNVGSYF LGANLSTLAV IYDMVPYLIL AALPFVVNGA
LIIFSSGGIR RREKIQRPTM LVNGIVSQDC SSPIISLVRL IVADRPMTEY DIFKSLVLIT
SVTSALTLIL VVVIKALQLP I