Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0780 |
Symbol | rps15p |
ID | 4617113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 707081 |
End bp | 707536 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639783874 |
Product | 30S ribosomal protein S15P |
Protein accession | YP_930299 |
Protein GI | 119872292 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0184] Ribosomal protein S15P/S13E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0774456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.0146525 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCACATA GATCTCGTCA CAAAAAGGGG CGTTCGAGAT CTGTAAGACC CGCCCATCCA ACAGTGCCTA CTTGGATACA ATATACACCA GACGAAGTTG AGCAATTAGT TGTGGAGTTA GCACGTCGCG GCTTTCCCCC TTCGCAAATT GGAATAATCC TAAGGGATCA ATATGGCATC CCTCTTGTAA AGCCTATAAC TGGCAAAAAA CTTACAAAAA TTCTAGAAGA GCACGGTATA AGACAAGAGA TTCCGGAAGA TTTGTTAAAT TTAATAAAGA GAGCCTTGAG AATTAGAAAA CATTTAGAGG AGCACCCCAA AGATATGGCG TCTCGAAGGG GGTTGCAACT TGTAGAGTCT AAAATACATA GATTGATAAA GTATTACAAG AGAGTTGGTA AGTTACCAAA GGAATTTGTC TATAACCCTG AGGCTTTGTC TCATCTGGCG ACCTAG
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Protein sequence | MPHRSRHKKG RSRSVRPAHP TVPTWIQYTP DEVEQLVVEL ARRGFPPSQI GIILRDQYGI PLVKPITGKK LTKILEEHGI RQEIPEDLLN LIKRALRIRK HLEEHPKDMA SRRGLQLVES KIHRLIKYYK RVGKLPKEFV YNPEALSHLA T
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