| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0770 |
|---|
| Symbol | |
|---|
| ID | 4617058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 698336 |
|---|
| End bp | 699529 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639783864 |
|---|
| Product | aminotransferase, class I and II |
|---|
| Protein accession | YP_930289 |
|---|
| Protein GI | 119872282 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.0102863 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGGGT TTTCGCCTAG GATTTCCGCG TTAAGGGAGT CGCCAACTCG GAAGATCGAC
GAGTTACGTG AGAGACTAAA AAGAGAGAAC CGAGACGTGA TTCTGTTGTC TACAGGCCAG
CCTAGTATTC CCCCTCCTCG AGAGGTGAGA GAAGTAATGA GAGAGCTTCT CAAAATAGAT
TCTATGGAAC TCTATGGTTA TACGCCTTCT CAAGGCATCT ACGAGGTTAG GCAAGCGATT
TCCGAGGATT TGAAGAGGCT AGGAGGGCTC GATATTCCTC CGGAGCAAAT TGTGTTAACC
GCGGGCGGTC AAGCCGCTAT GTTTTCAACG CTTGCCACGC TGTTAGAGCC AGGGGATGAG
GTCGTTGTGA CAGATCCGAC ATACTTCGGC TACAGACCTC TTATTGAGTA CTTCGGCGCC
ACCGTAAAAC CGGTTAGGAC AACTCTTGAA AACGGCTTTC AGCCGGAGCC TGAGGTGCTG
AAGTCTGCAA TTGGTAGGAG AACTAAGGCC GTTATCTTAG TCTCCCCAGA TAATCCAACA
GGCAGAGTTC TAAGAGAAGA TATTGCAAAA GCTATTGCAG ACTTGGCAAG AGACTACGAT
TTTTGGATTA TTACAGACGA GGCTTATAAG ACATTAATAT ATGAGGGGCA TCATGTCTAC
ATCTACAAAT TCGCGCCTGA ACATACAATT TCGATAAATA CATTTTCTAA GGACCCGGCT
ATACCTGGAT GGAGATTAGG CTATGTATAC GGCCCCCCAG AGGTAATACC GAAAATAAAG
CTAATGAATG AAGAAATGGT ATATTGCCCC CCGTCTTTTG CACAGAGATT AGTGTCTATA
TATTTACGTT CTGAAGTCAG AATGAAGTAT ATCAGAGAAG TTGTTGAGAT ATACCGCCAT
AAAAGAGATA TCGCTGTTTC GGCGTTGAGA AGATATGTGC CAGAGGCTAG ATTTATTGTA
CCTTCGGGCT CTATGTTTAT ATTCGTCGAC CTTTCTAGAT ATATCTACGA TGGTGAAGAG
TTTGCCAAAA AACTACTGGA GAAGTACGGC GTGGCAGTAG TGCCTGGGTC ATATTTTAGT
GGAATATATA GAGCCGCAGT GCGTATATCC TTTGTAACCG AAACTCCTGA GAGAATTGAG
GAGGGCATTA GAAGAATAGG CGAGGCTGTG ACCACCGGTT TAGAAAAACC ATAG
|
|---|
| Protein sequence | MRGFSPRISA LRESPTRKID ELRERLKREN RDVILLSTGQ PSIPPPREVR EVMRELLKID
SMELYGYTPS QGIYEVRQAI SEDLKRLGGL DIPPEQIVLT AGGQAAMFST LATLLEPGDE
VVVTDPTYFG YRPLIEYFGA TVKPVRTTLE NGFQPEPEVL KSAIGRRTKA VILVSPDNPT
GRVLREDIAK AIADLARDYD FWIITDEAYK TLIYEGHHVY IYKFAPEHTI SINTFSKDPA
IPGWRLGYVY GPPEVIPKIK LMNEEMVYCP PSFAQRLVSI YLRSEVRMKY IREVVEIYRH
KRDIAVSALR RYVPEARFIV PSGSMFIFVD LSRYIYDGEE FAKKLLEKYG VAVVPGSYFS
GIYRAAVRIS FVTETPERIE EGIRRIGEAV TTGLEKP
|
|---|
| |