Gene Pisl_0718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0718 
Symbol 
ID4616518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp653818 
End bp654399 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content45% 
IMG OID639783813 
Productphage SPO1 DNA polymerase-related protein 
Protein accessionYP_930239 
Protein GI119872232 
COG category[L] Replication, recombination and repair 
COG ID[COG1573] Uracil-DNA glycosylase 
TIGRFAM ID[TIGR00758] uracil-DNA glycosylase, family 4 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.809619 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACTTGG AGGATCTAAA CGAGAAAATT AAGAGGTGCA CAAGATGTCC ACTACATCTA 
TACAGGAAAA ATGCCGTACC TGGCGAGGGG TCTCTAAAAC TTGGTATAAT GATCGTGGGA
GAGGCCCCTG GGGCTTCTGA AGATGAGGAG GGGAGGCCGT TTGTAGGAGT AGCTGGACAG
CTACTTACAA AAACACTTGC CAAACTTGGC ATCTCAAGAG ACGATGTGTA TATAACAAAT
GTCGTAAAAT GTAGGCCCCC CGGCAATAGA ACTCCTACAA GAGAGGAGAT AGAAGCTTGT
CTTCCCTACC TTCTACAACA GATAGTGATT TTGAAACCAA AGAGAATTGT TGCGCTAGGT
TTAATCAGCG GGAAGACACT CCTAAAGCTT GTAGGGAGAG AGGTAGACAA AATTGGCAAT
GTAAGAGGGA AATGCTTCCG GGGACAAGTG GCTGGAGTAA ATCTAGAGAT ATGTTTAACA
TATCATCCAG CAGCTGTGTT GAGAAACCCC CATCTTAGGG AAGTTTTTGA AAACGACTTA
GCGACGTTTT TTGGCGGCGG TTTGCCGCCT TTAAACAAAT AA
 
Protein sequence
MDLEDLNEKI KRCTRCPLHL YRKNAVPGEG SLKLGIMIVG EAPGASEDEE GRPFVGVAGQ 
LLTKTLAKLG ISRDDVYITN VVKCRPPGNR TPTREEIEAC LPYLLQQIVI LKPKRIVALG
LISGKTLLKL VGREVDKIGN VRGKCFRGQV AGVNLEICLT YHPAAVLRNP HLREVFENDL
ATFFGGGLPP LNK