| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0703 |
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| Symbol | |
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| ID | 4616694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | - |
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| Start bp | 638539 |
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| End bp | 641922 |
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| Gene Length | 3384 bp |
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| Protein Length | 1127 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639783798 |
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| Product | DNA-directed RNA polymerase subunit B |
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| Protein accession | YP_930224 |
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| Protein GI | 119872217 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR03670] DNA-directed RNA polymerase subunit B |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.347908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0027158 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGTAGATC TTCTTCCACT CCCCGTCGTC ACAAGCCAGC AGGATGATTC ATTCCCCACA
AAAGATGACA GATGGACTTT AGTAGAGAGA TTTATTAGAG ATAAAGGACT TGCTAACCAT
CAGATAAAGT CTTTTAACGA CTTTTTAGAT AAGAAACTCC CTAAGATTGT AGAAGACTTT
AAAGTTATTG AGACGGAAAT TAAGGGCCTT AAGCTAGTTT TAGAGCGTAT TGAAGTTGGC
TGGCCTAGGA TTAAAGAAAG CGACGGCTCT GAATCGTTAA TCTATCCCAT GGAGGCCCGG
CTACGTAATG CGACATATTC CGCTCCACTA TATTTAACCG CCACTCTTTA TGTAGACGAT
GAGCCATATG TCACAGAGAC TTTTTACATA GGCGAATTGC CCATAATGGT TAAATCCAAG
AGGTGTAATC TAACTAGACT TAAGCCTAGT GAGTATGTAA AGAAATTTGA AGATCCGCAA
GACTTCGGCG GCTATTTCAT AATAAATGGG AGTGAACGCG TTATTATCTC TCAAGAGGAT
TTAGTAACCG ATAGGCCTAT TTATGATAAG GGAGATAAGC CATCGGTAAA ATATATTGCA
AAAACCATCT CAACCGGCAT AGGCTATAGA AGTACGCTTG TTGTAGAACT TAACAAAGAC
GGCATTATAT ATGTCACCCT TTCTGCCATG CCTGTAAAAA TACCGTTTCC AGTATATATG
AAAGCTCTTG GTCTTGAGAC TGACGAAGAC GTTGTCAAGG CGGTTTCTGA CGACCCAGAA
ATACAAAAAG AGCTACTGCC CTCTCTTATA GCGGCTAACC AAATTGCCAT AACAAAGGAG
GATGCGTTAG ATTTCATAGG CGGTAAAGTT GCCGTGGGCC AACCTAAACC TATTAGAGTT
GAAAAAGCGC TTCAACTACT TGACCGTTAT TTTCTCCCTC ATTTAGGCAC TACTGTACCT
GATGAGAAAA AACAACAGGA AATTAGACTG AAGAAGGCCC TCATGCTGGG CCAAATTGTC
AAGGGCCTTA TAGAGTTAGA CCTCGGCAGA AGAAAGCCCG ACGATAAAGA CCATGTCGCT
AACAAAAGAG TTAGACTAGT GGGCGATTTG ATGACTCAAC TCTTCAGGAC AGTCTTTAAG
CAGTTTTTGC AAGAGTTAAA AAGCCAGTTA GAGAAGTATT ATGCGCGGGG TAGAATTCCG
CATATTCAGA CTATAGTGAG ACCAGACATA ATCACAGAAC GTGTGAGACA AGCGCTCGCT
ACAGGGAATT GGGTTGGTGG TAAAACAGGC GTATCCCAGA TATTAGATCG CACTAATTAT
ATGTCAACTT TAAGCTACTT AAGACGTGTT GTATCATCGC TTTCTAGGAC ACAACCTCAC
TTTGAGGCGC GTGATCTTCA TCCAACTCAA TGGGGTAGAC TTTGTGCCGT GGAAACGCCA
GAGGGACAAA ACGTCGGTCT TGTTAAAAAC TTGGCGCTTC TCGCAGAGAT AACTACAGGT
GTTGACGAGG GGGAGGTAGA GCAGTTGTTA TATAACCTAG GCGTTGTGCC TATTTTAAAG
GCCAGAGACG AGGGCATCCG TGGTGCGGAG GTCTACATCA ATGGGAGATT AATAGGTATA
CATCCTAACC CAGACGAATT AGCCAGGACA GTAAGAAGCC TAAGAAGACA GGGGAAAATA
AGTGATGAAA TAAACATAGC TGTCTTAAAC AATGCTGTAT ATGTCAACTG CGACGGAGGC
CGCATTAGAA GGCCTCTCTT AGTCGTAGAA AATGGAAAAC TCAAATTAAC AAAAGAAATT
GTTGAAAAAG TTAGACGTGG CGAATTGACG TGGGACGACT TAGTAAAAAT GGGAGTTATA
GAGTACCTAG ATGCTGACGA AGAGGAGAAT GCCTATATCG CCACAGATCC TCACGATGAC
TTAAGCAAAT ACACACATGT CGAGATTATA CCATCTGCTA TACTTGGCGC CGTGGCGTCT
ATAATACCCT ATCTTGAGCA TAACCAATCG CCGCGTAATC AGTATGAAGC TGCGATGGCT
AAACAATCTC TCGGACTACC GCAGTCTAAC TTCCTCTATA AACTTGATTC ACGAGGCCAC
ATGTTATATT ACCCCGAAAG ACCTATTGTC ACAACAAGAG GCTTAGAGCT TATAGGCTAT
TCAAAAAAGC CGGCTGGACA AAACGCCGTT GTTGCACTTC TCACATACAC GGGCTACAAT
ATGGAAGACG CCATTATTTT AAACAAAGCC GCAGTAGAGC GTGGCATGTT CCGTTCGGTC
TTCTACCGCA CTTATGAAAC AGAGGAACAG AAATATCCTG GCGGAGAGGA GGATAAAATA
GAAGTACCAG ATAGTTCAGT TAAAGGTTAT AGAGGACCTG AAGCATACAG CCACCTAGAC
GAAGACGGCA TAGCTCCACC AGAGGTCTAT GTTAGTAGCA ATGAGGTTAT TATAGGCAAA
ACGTCGCCGC CTAGATTTTA CACGACGCTA GAGACAGAAC GTATTTTAAA AGAGAGAAGA
GATTCCTCTG TTGCTGTAAG ACGCGGCGAG AAGGGCATTG TAGATAGGGT AATTATTACG
GAGTCTCCAG AAGGCAATAG GTTAGTAAAA GTGAGACTGA GAGAACTTAG GATTCCAGAA
CTAGGCGATA AGTTTGCCTC TCGCCATGGC CAAAAGGGCG TCGTTGGCAT GATATTGAGA
CACGAGGATA TGCCGTTTAC GGAGGAGGGC ATAGTCCCAG ATATAATCGT TAATCCACAT
GCGTTGCCAT CGCGTATGAC TGTAGGACAG CTTTTAGAAA GTATAGCAGG GAAAATAGGG
GCGTCTCTTG GCGCATTAGT AGATGCAACG CCGTTCGAAG GTGTGAAAGA AGAAGAACTA
AGAAAACTAC TAATGAAGCT AGGCTATAAG TGGGATGGCA AAGAGGTTAT GTACAGTGGA
ATAACAGGCG AAAAGCTTGT GGCAGATATC TTCATAGGCG TAGTCTACTA CCAGAAACTG
CATCACATGG TTGCCGATAA GATCCACGCA AGAGCAAGAG GGCCTGTCCA GATCTTAACT
AGACAACCAA CTGAGGGGCG TTCGCGCGAG GGCGGCCTTA GGTTAGGCGA AATGGAAAGA
GACGTCTTGA TCGCACACGG CGCCTCGGCG TTGCTATATG AAAGACTTGT CGAATCTAGT
GACAAATATA CGATGTATGT ATGTGAGCTG TGCGGGCTCC CGGCTTATTT AGATGCCAGA
ACAAACAAGC CGAGATGTCC GATACACGGC GACACTGGGC AGTTCGCTAA AGTAATAGTG
CCGTATGCAT TTAAACTACT TCTGCAAGAG CTGATAGCCC TTGGCATATA TCCAAAGCTC
GAGCTTTCTG AAATTTTAGA ATAG
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| Protein sequence | MVDLLPLPVV TSQQDDSFPT KDDRWTLVER FIRDKGLANH QIKSFNDFLD KKLPKIVEDF
KVIETEIKGL KLVLERIEVG WPRIKESDGS ESLIYPMEAR LRNATYSAPL YLTATLYVDD
EPYVTETFYI GELPIMVKSK RCNLTRLKPS EYVKKFEDPQ DFGGYFIING SERVIISQED
LVTDRPIYDK GDKPSVKYIA KTISTGIGYR STLVVELNKD GIIYVTLSAM PVKIPFPVYM
KALGLETDED VVKAVSDDPE IQKELLPSLI AANQIAITKE DALDFIGGKV AVGQPKPIRV
EKALQLLDRY FLPHLGTTVP DEKKQQEIRL KKALMLGQIV KGLIELDLGR RKPDDKDHVA
NKRVRLVGDL MTQLFRTVFK QFLQELKSQL EKYYARGRIP HIQTIVRPDI ITERVRQALA
TGNWVGGKTG VSQILDRTNY MSTLSYLRRV VSSLSRTQPH FEARDLHPTQ WGRLCAVETP
EGQNVGLVKN LALLAEITTG VDEGEVEQLL YNLGVVPILK ARDEGIRGAE VYINGRLIGI
HPNPDELART VRSLRRQGKI SDEINIAVLN NAVYVNCDGG RIRRPLLVVE NGKLKLTKEI
VEKVRRGELT WDDLVKMGVI EYLDADEEEN AYIATDPHDD LSKYTHVEII PSAILGAVAS
IIPYLEHNQS PRNQYEAAMA KQSLGLPQSN FLYKLDSRGH MLYYPERPIV TTRGLELIGY
SKKPAGQNAV VALLTYTGYN MEDAIILNKA AVERGMFRSV FYRTYETEEQ KYPGGEEDKI
EVPDSSVKGY RGPEAYSHLD EDGIAPPEVY VSSNEVIIGK TSPPRFYTTL ETERILKERR
DSSVAVRRGE KGIVDRVIIT ESPEGNRLVK VRLRELRIPE LGDKFASRHG QKGVVGMILR
HEDMPFTEEG IVPDIIVNPH ALPSRMTVGQ LLESIAGKIG ASLGALVDAT PFEGVKEEEL
RKLLMKLGYK WDGKEVMYSG ITGEKLVADI FIGVVYYQKL HHMVADKIHA RARGPVQILT
RQPTEGRSRE GGLRLGEMER DVLIAHGASA LLYERLVESS DKYTMYVCEL CGLPAYLDAR
TNKPRCPIHG DTGQFAKVIV PYAFKLLLQE LIALGIYPKL ELSEILE
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