Gene Pisl_0700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0700 
Symbol 
ID4618237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp634363 
End bp634668 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content42% 
IMG OID639783795 
Product50S ribosomal protein L30e 
Protein accessionYP_930221 
Protein GI119872214 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1911] Ribosomal protein L30E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0156911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.0492944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTAGATA TCAGTAGAGA ATTGCAAGTA GCCATAAGCA CAGGTAAGGT TGTAATGGGT 
TTCAAAGAGG TTAAGAAAAC AATACTTACA AGTACTCCAA AATTGGTGAT ATTGGCTGCA
AATGCTCCCA AATGGGCAAA GGAAGACGTT GAATATTATG CCAAATTAGC AGGAGTACCT
GTATTTATAT TCCCAGGCTC AAGTATAGAA CTAGGCGCAG CGGCTAAAAG ACCTCATAAA
ATCATGGCGC TAGCCGTGAT AGATCCCGGC CAGAGCGAAA TATTAAAGTT GGTTGAACAT
GCCTGA
 
Protein sequence
MVDISRELQV AISTGKVVMG FKEVKKTILT STPKLVILAA NAPKWAKEDV EYYAKLAGVP 
VFIFPGSSIE LGAAAKRPHK IMALAVIDPG QSEILKLVEH A