Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0692 |
Symbol | |
ID | 4617539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 630772 |
End bp | 631032 |
Gene Length | 261 bp |
Protein Length | 86 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639783787 |
Product | like-Sm ribonucleoprotein, core |
Protein accession | YP_930213 |
Protein GI | 119872206 |
COG category | [K] Transcription |
COG ID | [COG1958] Small nuclear ribonucleoprotein (snRNP) homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.22559 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAAGG CGCCACAGCA ATTAAAATTA CCTTCTCCAA TTAAGGTATT GACAAAAATG CTAAACAAAG AGATTGTTGC CCGACTAAAG GGGGGAGTTG CAGTAAAAGG TACTTTGACA GCTTATGATG GCTGTATGAA TCTGGTTCTT GACAATGCTG CAGAGTTAAA TAACTCTGGC GAGCCTGTCA CACGATATGG TAGAATTGTG GTTAGAGGGT CCCAAGTAAT TTATGTCTCG GCATTAGAGG TAACACCATG A
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Protein sequence | MSKAPQQLKL PSPIKVLTKM LNKEIVARLK GGVAVKGTLT AYDGCMNLVL DNAAELNNSG EPVTRYGRIV VRGSQVIYVS ALEVTP
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