Gene Pisl_0692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0692 
Symbol 
ID4617539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp630772 
End bp631032 
Gene Length261 bp 
Protein Length86 aa 
Translation table11 
GC content41% 
IMG OID639783787 
Productlike-Sm ribonucleoprotein, core 
Protein accessionYP_930213 
Protein GI119872206 
COG category[K] Transcription 
COG ID[COG1958] Small nuclear ribonucleoprotein (snRNP) homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.22559 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAGG CGCCACAGCA ATTAAAATTA CCTTCTCCAA TTAAGGTATT GACAAAAATG 
CTAAACAAAG AGATTGTTGC CCGACTAAAG GGGGGAGTTG CAGTAAAAGG TACTTTGACA
GCTTATGATG GCTGTATGAA TCTGGTTCTT GACAATGCTG CAGAGTTAAA TAACTCTGGC
GAGCCTGTCA CACGATATGG TAGAATTGTG GTTAGAGGGT CCCAAGTAAT TTATGTCTCG
GCATTAGAGG TAACACCATG A
 
Protein sequence
MSKAPQQLKL PSPIKVLTKM LNKEIVARLK GGVAVKGTLT AYDGCMNLVL DNAAELNNSG 
EPVTRYGRIV VRGSQVIYVS ALEVTP