| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0683 |
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| Symbol | |
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| ID | 4616445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | - |
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| Start bp | 621919 |
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| End bp | 624114 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639783777 |
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| Product | AAA family ATPase, CDC48 subfamily protein |
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| Protein accession | YP_930204 |
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| Protein GI | 119872197 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01242] 26S proteasome subunit P45 family
[TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.473985 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTGAAT GGATTGAACT TAGGGTACTT GAGAGTAAAG CTCGCGATGC TAACCGTCCC
ATCGTTAGAA TAGATCCTGA AGTTATGGAA AGAGCCGGCA TTATTGTCGG CGATGTTGTA
GAGATCGTTG GACGGAGGAG GACAGCGGCA AAGGTTTGGA ACGGTCTCCC AGAAGACCGC
GGCAAAGGCG TAATCAGAAT GAACAGCATT TTAAGAAAGA ACGCTGATGT AACCCTAAAC
GAAACAGTGA GAGTGAGGAA GATAGAGCCT AAGCCTGCCG CCTTTGTAAA GCTCGCCCCT
GTGTCTATGA CTATTGCAGT AGATACCAAC TTCCTCCAAT ACATCAAACA GAGACTTAGA
GAATACATCG TAGTAGAGGG CGATATGCTA CAGATATATG TGCTGAGCCA GCCGCTTACG
TTTCAAGTGG TTCAGACAAA GCCGGCAAAC GCCGTGTTAG TCATCACGGA GGACACCCAG
ATCCAGATTT TTGAAAAGCC GGTTTCGGGC GTTAGGATAC CCCACGTTAC TTGGGAGGAT
ATTGGTGATT TGGAGGATGC TAAACAGAAG ATTCGTGAGC TTGTGGAGCT TCCTCTTAGG
CATCCTGAGT TGTTTAAACA TTTGGGTATT GAGCCTCCGA AGGGTATCCT CTTGATTGGC
CCCCCTGGCA CGGGCAAGAC TCTCCTCGCC AAGGCTGTGG CTAACGAGGC CAACGCCTAC
TTCGTCGCTA TAAACGGCCC CGAGATCATG TCGAAGTACT ACGGCGAGTC TGAGGCGCGG
CTTAGGGAGA TTTTCGAAGA GGCGAAGAAA AACGCCCCCG CCATAATCTT CATAGACGAG
ATAGACGCCA TAGCCCCCAA ACGCGAGGAA GTCACGGGAG AGGTAGAAAA GCGAGTGGTG
GCACAACTAC TAACCCTAAT GGACGGACTA CAAGAGAGAG GACAAGTAAT AGTAATAGGA
GCAACCAACC GCCCAGACGC AATAGACCCA GCACTAAGAA GACCAGGAAG ATTCGACAGA
GAGATTTGGA TAAACCCGCC GGACTTTAAA GGTAGGTATG AAATCCTTCT CATACATACT
AGGAATATGC CTCTTGCACC TGACGTAGAT CTGAGAAAGC TAGCCGAGAT GACACACGGT
TTTTCTGGGG CCGATCTCGC CGCACTTGCT AGAGAGGCTG CTATGTCTGC TCTAAGAAGA
GCTATTCAAA GCGGTCTTAT CGACCTTAAC CAACCCTCTA TCCCGCCTGA GGCTCTTGAA
AAAATCAAAG TTACTATGTC AGACTTCATA AACGCCATGA AAGAGATAAT ACCATCTGCT
CTAAGAGAGA TACACATAGA AGTTCCCCGT GTCCGTTGGG AGGACATAGG CGGCTTAGAA
AACGTTAAAC AGGAACTCAG AGAGGCCGTG GAGTGGCCTC TCAAATACCC TGATAAGTTT
AAGAAATTCG GTCTCCGTGC TCCTAAGGGC ATTCTCCTAT TTGGACCACC TGGCACAGGA
AAGACACTAC TGGCAAAGGC GGTGGCCACA GAGTCGGGGG CGAACTTCAT CGCCGTCAGA
GGTCCAGAGA TATTTTCCAA GTGGGTTGGC GAGTCGGAGA AGATGGTTAG AGAGATTTTT
AGAAAAGCCC GCATGGCTGC ACCAGCGGTC ATCTTTATAG ATGAGGTAGA TGCACTTGCA
ACAGCAAGAG GTCTAGGCGG AGATTCCTTA GTTAGCGAAC GCGTTGTTGC GCAACTACTA
GCTGAAATGG ATGGTATAAA AGCGCTTGAA AATGTAGTAG TTATAGCAGC TACCAATAGG
CCGGACCTTA TAGATCCGGC GTTGTTAAGA CCAGGCCGTT TCGATAGAAT AATCTACGTC
CCACCGCCTG ATTTTAAAGC CAGGCTTGAA ATATTGCTAA TTCACACCAA GGCAACTCCT
CTAGCTAAAG ACGTCGACCT CGAAGAGTTA GCACGTAGAA CCGAGGGCTA CTCTGGCGCA
GACTTAGAGC TATTGGTAAG AGAGGCAACG TTCTTGGCAT TACGCGAGGA TATAAACGTC
AGAGAGGTTT CAATGAGACA CTTTGAAGAG GCACTTAAAA AGGTCAGACC CTCGATTACT
CCAGAGATGT TAAAATTCTA CGAAAGTTGG TTAGAAAAAG CGAGACAGTT GACGGTAGCC
GTTAAGACTA AAGCGACGCC TCCACTATAT CTATGA
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| Protein sequence | MSEWIELRVL ESKARDANRP IVRIDPEVME RAGIIVGDVV EIVGRRRTAA KVWNGLPEDR
GKGVIRMNSI LRKNADVTLN ETVRVRKIEP KPAAFVKLAP VSMTIAVDTN FLQYIKQRLR
EYIVVEGDML QIYVLSQPLT FQVVQTKPAN AVLVITEDTQ IQIFEKPVSG VRIPHVTWED
IGDLEDAKQK IRELVELPLR HPELFKHLGI EPPKGILLIG PPGTGKTLLA KAVANEANAY
FVAINGPEIM SKYYGESEAR LREIFEEAKK NAPAIIFIDE IDAIAPKREE VTGEVEKRVV
AQLLTLMDGL QERGQVIVIG ATNRPDAIDP ALRRPGRFDR EIWINPPDFK GRYEILLIHT
RNMPLAPDVD LRKLAEMTHG FSGADLAALA REAAMSALRR AIQSGLIDLN QPSIPPEALE
KIKVTMSDFI NAMKEIIPSA LREIHIEVPR VRWEDIGGLE NVKQELREAV EWPLKYPDKF
KKFGLRAPKG ILLFGPPGTG KTLLAKAVAT ESGANFIAVR GPEIFSKWVG ESEKMVREIF
RKARMAAPAV IFIDEVDALA TARGLGGDSL VSERVVAQLL AEMDGIKALE NVVVIAATNR
PDLIDPALLR PGRFDRIIYV PPPDFKARLE ILLIHTKATP LAKDVDLEEL ARRTEGYSGA
DLELLVREAT FLALREDINV REVSMRHFEE ALKKVRPSIT PEMLKFYESW LEKARQLTVA
VKTKATPPLY L
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