Gene Pisl_0663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0663 
Symbol 
ID4617039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp603041 
End bp604138 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content45% 
IMG OID639783757 
Producttranslation initiation factor IF-2B subunit alpha 
Protein accessionYP_930184 
Protein GI119872177 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0182] Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 
TIGRFAM ID[TIGR00512] S-methyl-5-thioribose-1-phosphate isomerase
[TIGR00524] eIF-2B alpha/beta/delta-related uncharacterized proteins 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.109881 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAAAC TAGTGGAGGA ACTGAAAAGG AAGTTTAGAC CAAAGATTAA GCCAATAGAG 
TGGAAAGGTG ACAAGTTAGT ACTACTAGAC CAGAGATTTC TGCCATTTGA AACCAGATAT
TTCGAAGCAA GAACCGTCGC CGATGTCGCT GAAGCTATAC GCAACATGGT AGTTAGAGGT
GCACCTGCCA TTGGCATAAC GGCGGCATTT GGGATGGTTC TCTCGCTAGT TGAGAAAAAG
CCCAGGACAG TAGAGGAGGC GTTAAACACG CTCACGTCAG CAAAGGAGAC ACTAGCTAAA
ACCAGACCCA CAGCTGTCAA TCTCTTCTGG GCACTTGAAC GTATGTATAA CAAAGCAACA
GAAATAGCTA CATCAACGGC AACAGTAGAC GAGCTTAAAT CCGCCCTAGA GGAGGAAGCC
AAAAGAATTT TCGAAGAAGA ACTCGATGCC GAAATCAGGA TAGGGCTTTA CGGCGCCGAG
CTTTTAGAAA ATGGTGACAC AGTGCTTACG ATTTGCAATG CAGGAGGACT TGCGACAGGA
ACCGGCTTAG GTACTGCAAC TGCCCCTATC TATGTCTCTA TGATGTTAGG AAAACAGGTA
TCCGTAGTTG CGCCAGAGAC TAGGCCTTGG CAACAAGGCG CCAGACTTAC GGTGTATGAG
CTTATTCAAA ACGGCGTGCC GACAAAACTC ATAGCTGATA CAGCCGTGGG TCTTGTAATG
CTTAAGCGCC TTGTGAATAT CGTCATGGTC GGCGCAGACC GCATACTTTT AGACGGCCAT
GTATACAACA AAATAGGTAC GCTCAATGAG GCCGTACTTG CTCATGAATT TGGAATTCCA
TTTTACGTAC TAGCGCCGAC AAGTACAATA GATCCAAAAA GTAGAGTAGA AGACGTCGAG
ATAGAGGAGA GAGATCCAGA TGAGGTACGT ACAGCTAGAT CTAACCAAGG CATAGTATAT
GTCACATTAA AAGAAGTCCC TGTCTACAAC CCAGTATTTG ACGTCACACC GCCTAAGTAT
ATCACTGGGA TCATTACAGA AAAAGGCGTA GCGACACAGC CGTTATATAA AAACCTTCGC
AAATTGTTGA ATATGTAA
 
Protein sequence
MEKLVEELKR KFRPKIKPIE WKGDKLVLLD QRFLPFETRY FEARTVADVA EAIRNMVVRG 
APAIGITAAF GMVLSLVEKK PRTVEEALNT LTSAKETLAK TRPTAVNLFW ALERMYNKAT
EIATSTATVD ELKSALEEEA KRIFEEELDA EIRIGLYGAE LLENGDTVLT ICNAGGLATG
TGLGTATAPI YVSMMLGKQV SVVAPETRPW QQGARLTVYE LIQNGVPTKL IADTAVGLVM
LKRLVNIVMV GADRILLDGH VYNKIGTLNE AVLAHEFGIP FYVLAPTSTI DPKSRVEDVE
IEERDPDEVR TARSNQGIVY VTLKEVPVYN PVFDVTPPKY ITGIITEKGV ATQPLYKNLR
KLLNM