| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0656 |
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| Symbol | rfc |
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| ID | 4618319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | + |
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| Start bp | 597599 |
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| End bp | 598588 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639783750 |
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| Product | replication factor C small subunit |
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| Protein accession | YP_930177 |
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| Protein GI | 119872170 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0470] ATPase involved in DNA replication |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0195839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.005923 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCGAGT TGTTTTGGTT TGAGAAGTAT CGTCCTCGTT CGTTTGATGA GGTGGTTGAT
TTGGAGGAGG TTAAGAGCCG GCTTAGGGAG TTTGTGAAGA GTGGTAATAT GCCGCATCTC
CTCTTCTACG GCCCTCCTGG CACTGGGAAG ACTACCATGG CTCTTGTCTT GGCGAGAGAG
CTCTACGGCG AGTATTGGCG TGAGAATACG CTAGAGCTCA ACGCCTCAGA TGAGAGAGGT
ATAAACGTAA TCCGGGAGAG AGTAAAGGAA TTCGCCCGCA CAGCCCCAGT AGGCAAAGCC
CCCTTCAAAC TAGTCATACT AGACGAAGCA GACAACATGA CAAGCGACGC ACAACAAGCA
CTAAGAAGAA TAATGGAAAT ATACGCACAA AACACAAGAT TCATACTACT GGCAAACTAC
GTCTCACGTA TCATAGACCC CATAATTTCA AGATGTGCAG TATTTAGATT TTCTCCAATG
CCGCGACATT TAATGGCAGA GAGACTTAAG TATATCGCCA AGAGCGAGGG CGTAGAAGTT
AAAGAAGATG CCATAGATTT GATATATGAG CTTTCTGAGG GAGATATGCG CAAAGCTATA
AACATATTAC AAGTAGCTGC AGCAACAAAT AAGATAGTTG ATAGAAATGT GGTTGCCGCT
GCAGCTGCCG CCATCAGACC TACCGATATA GTGGAACTCT TTAATTTAGC GCTTAGCGGC
GATTATTTAA AGGCACGTGA AAAGATGAGA GAGCTTATGT ACGTCAAGGG CGTAGCTGGT
GTAGATTTCA TTAGAGCGTT TCAGAGAGAG CTTATCCGTA TGTCTCTAGA CGATGAAACA
AAGGCAGAGG TAGCAGAGCT TTTAGCCGAT GTTGACTATA GATTAACACA AGGCGCCGAC
GAGGAAATCC AATTATCATA TTTCCTCGCC AAGCTTGGCT CTATAGGTAA AAAAATAAGG
GCCGCAAGCC TCCCGCCTAA AAAGAGGTAA
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| Protein sequence | MAELFWFEKY RPRSFDEVVD LEEVKSRLRE FVKSGNMPHL LFYGPPGTGK TTMALVLARE
LYGEYWRENT LELNASDERG INVIRERVKE FARTAPVGKA PFKLVILDEA DNMTSDAQQA
LRRIMEIYAQ NTRFILLANY VSRIIDPIIS RCAVFRFSPM PRHLMAERLK YIAKSEGVEV
KEDAIDLIYE LSEGDMRKAI NILQVAAATN KIVDRNVVAA AAAAIRPTDI VELFNLALSG
DYLKAREKMR ELMYVKGVAG VDFIRAFQRE LIRMSLDDET KAEVAELLAD VDYRLTQGAD
EEIQLSYFLA KLGSIGKKIR AASLPPKKR
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