Gene Pisl_0655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0655 
Symbol 
ID4617315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp596895 
End bp597569 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content44% 
IMG OID639783749 
Product30S ribosomal protein S7P 
Protein accessionYP_930176 
Protein GI119872169 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01028] ribosomal protein S7(archaeal)/S5(eukaryotic) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.156738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.00506477 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGACTG GCATCTTTGG CGAACAACTT CCAAAACATA CTAAGATTGA GTATATAGGC 
GACGTACCCA TCATAGAGGA ATGCCCCCGT GACATAAAAA CTCTCAACGG CGAACCTGTG
CTGTTGTTTG GAAAGTGGAG TTTTGAAAAT GTCGTAGTGA AAGACCCGGG CTTACGAAGG
TATATCTGTC TAAAGCCGGT GCTATTGCCT CACACAGAGG GGCGCTACCA GAAGCATAGG
TTTGGAAAGG CTAGAATACC TATCGTCGAA CGTCTTATAA ACCTAATGAT GAGACCTGGA
CGTAATACTG GCAAAAAACA TAAAGCTTAT AATATTGTTA AGAGAGCTTT TGATATCATT
TATTATAAAA CTGGACAGAA TCCTATCCAA GTATTGGTAG ATGCTATAAT TAACGTAGCG
CCTAGAGAGG AAGTTACGAG AATAATCATG GGCGGTATTG CTTACACAGT TTCTGTAGAT
GTCTCACCAC AGAGAAGACT AGATCTTGCC CTCCGTTGGA TTACCGAAGG TGCAAGGACG
TGCTCCTTCA ATAATCCAAA ACCTATAGAG GAGTGTCTTG CAGACGAAAT TATTGCAGCG
GCATCAAACG ACCCCAGAAG TTACGCAGTT AGAAAGCGCG AAGAGCTTGA ACGTATTGCC
GCTGCCTCGC GCTAA
 
Protein sequence
MSTGIFGEQL PKHTKIEYIG DVPIIEECPR DIKTLNGEPV LLFGKWSFEN VVVKDPGLRR 
YICLKPVLLP HTEGRYQKHR FGKARIPIVE RLINLMMRPG RNTGKKHKAY NIVKRAFDII
YYKTGQNPIQ VLVDAIINVA PREEVTRIIM GGIAYTVSVD VSPQRRLDLA LRWITEGART
CSFNNPKPIE ECLADEIIAA ASNDPRSYAV RKREELERIA AASR