Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0651 |
Symbol | |
ID | 4616289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 594547 |
End bp | 595323 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639783745 |
Product | putative circadian clock protein, KaiC |
Protein accession | YP_930172 |
Protein GI | 119872165 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.938042 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.00276287 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGGCGAGT CACATCTTTA CTATGAAACT ACACCCACAG GAATTGAGGG GCTTGATGTT ACAATAGGGG GCGGATTTAT TAGGGGCAGA ACGTATTTGA TCTCTGGCGA AACAGGGACG GCCAAAACTT TAACCGCACT CACGTTTCTC ATACAAGGTG CGTTAAAATA TGGGGAACCT GGCATATATA TATCCGTAGA TGAGACATAC GAGCAATTTG TAGAAGGCGC TAGGAGATTC GGATGGGATA TTGAAGAACT AAGAGCTAAA GGACTTATCG AGGTTTTAGT GCCGGAGATG GATATTGTAG AGCGTATTAG AGAGAAAGAT CCGACCGCGA TTGCCAAGTC GCTAGTTGCA TCTATTCGTG AATACGTCGT TGCACTAAAC GCCCAGAGAC TGGTTATTGA CCCTATTGCG CCGCTTGTCT CGCTTGACAA AGATGTACAA GTACTTAGGG AATATATCAG GGTATTAGTT ATGAGCATAG AGAGAGAGAT AGGGACAACC AATATCATTA CTACCGAAAT ACCCTCTGGT TCTGGCGCAA TAAGTAGGTA TGGAGTTGAG GAGTTTCTAG CGACGGGAGT GTTTATAATG GGTATAGCGA AAACTCGTGA CGGAAATTTC AAGAGGGTAA TGTTTATAAG AAAAATGCGG TGGAGTCCTG TCCACCCGGG GATTTATGAA ATAGAGATTG TCCCAAAAAT TGGCGTTGTG GTAAAAGGCC AAGTTAAAGA GCCTCTAGTC CCGGTCACCT ACTTACCAAC TCTATAA
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Protein sequence | MGESHLYYET TPTGIEGLDV TIGGGFIRGR TYLISGETGT AKTLTALTFL IQGALKYGEP GIYISVDETY EQFVEGARRF GWDIEELRAK GLIEVLVPEM DIVERIREKD PTAIAKSLVA SIREYVVALN AQRLVIDPIA PLVSLDKDVQ VLREYIRVLV MSIEREIGTT NIITTEIPSG SGAISRYGVE EFLATGVFIM GIAKTRDGNF KRVMFIRKMR WSPVHPGIYE IEIVPKIGVV VKGQVKEPLV PVTYLPTL
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