Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0648 |
Symbol | |
ID | 4617360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 591995 |
End bp | 593269 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639783742 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_930169 |
Protein GI | 119872162 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.567553 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.0038978 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAATTCG ACGTAGCCAT AGTGGGGGCT GGTCCCGCAG GATTAGCCGC GGCTTATAAA TTGGCATCTG CCGGTTTTAA AGTAGTAGTA TTAGAAAGGG GCAGAGAGCC GGGAGCTAAG GAGCTCTACG GCGGCCGTAT ATACGCCTAT TGGCTCGATA AATATCTACC GGAATTTCGT AAAGATGCGC CAGTTGATAG GTGGGTTAGA AAAGAGCGTG TTACATTTCT CACAGATGAT AAAGCACTAA CGCTCGAGTT TTCAATCGTA GAAAAAGAAA AGACAAGCTT TATTGTGCCG CTTGTTTCTT TCGTCTCCTG GATGGCTAAA TTAGCGCAAA ATGCTGGAGC AAAAATAGTA ACAGAGATTA CAGTAGACAG ACTTGTAAAA GATGACAAAG GCAGATTTAT AGGGGTTCAA TCTGGTTCTG ATACGCTACA CGCAGACTAT GTTATAGACG CAGAGGGCGT TAATAGGCTT CTTCTTGAGA GGGCTGGGAT AGTTAGAAAG CTAGAGCCAG AGGTCGTGGC AGTCGGCGTT AAGGAGGTGT TAAAATTTGA AAACAAGAAA ACTCTTGAAG AAAGGCTTGG CTTAGGCGAA GATGAGGGGC TTGCGTGGGC TATCGCTGGC TATCCCACCG AATACCTGCC TGGCGGCGGG TTTATATACA CATATAAGGA CTCTCTTGCA CTTGGTGTCG TTGTTTATCT AAGAAATTGG TCAAAGTTAA AAACGCCAGT GTACGACTTA GCTGAGAGGC TTAGATTACA TCCGTATATA GCGCCTTTAG TTAAAGGCGC TACTCTTCAG GAGTATGGAG GACACATGAC ACCAGTGGCG GGTATCAACA TGCCTCCTCC ACGTCTCTAT TATGATGGGT TATTGATAGT GGGAGATGCC GCCGGGTTCT TGCTACACAC AGGGGTATTA ATCAGAGGGG TGGACTTTGC CATAGCCTCT GGCGTTCTCG CGGCAGAGGC TATACGGGAG GCACGTAGTC CTTCTGCAGA GGATTTATCA ATATATGAGA AGAAGCTAAG GAATAGCTTC ATACTGCCGC AGCTTGAGAA ATATAGGAAG GCTGACAGAT TGTTAAGCGA CGAAACCCTT TTTAGAGATT TAACACTGTT GTCGACAGAG ACGGCACATA AGTATTTCAA CGTAGACGAA AACCATAGGA CACTATTTGA GGCACTACGC GATGCGTCGA AAAAGACTAA GGTAAACCTA GTAAAATTAA TGATAAATAT GCTAAGAATG GCGAAAAGTC TATGA
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Protein sequence | MKFDVAIVGA GPAGLAAAYK LASAGFKVVV LERGREPGAK ELYGGRIYAY WLDKYLPEFR KDAPVDRWVR KERVTFLTDD KALTLEFSIV EKEKTSFIVP LVSFVSWMAK LAQNAGAKIV TEITVDRLVK DDKGRFIGVQ SGSDTLHADY VIDAEGVNRL LLERAGIVRK LEPEVVAVGV KEVLKFENKK TLEERLGLGE DEGLAWAIAG YPTEYLPGGG FIYTYKDSLA LGVVVYLRNW SKLKTPVYDL AERLRLHPYI APLVKGATLQ EYGGHMTPVA GINMPPPRLY YDGLLIVGDA AGFLLHTGVL IRGVDFAIAS GVLAAEAIRE ARSPSAEDLS IYEKKLRNSF ILPQLEKYRK ADRLLSDETL FRDLTLLSTE TAHKYFNVDE NHRTLFEALR DASKKTKVNL VKLMINMLRM AKSL
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