Gene Pisl_0641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0641 
Symbol 
ID4617716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp585731 
End bp586000 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content53% 
IMG OID639783735 
ProductpaREP12 
Protein accessionYP_930162 
Protein GI119872155 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000929061 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.00106451 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCTCAACA ACGGGGTCGT TATAAACGCT ACGCGTGAGA TTATAAAGTT GGCCAGAGAG 
CATCAAGCTG CAATCGTAGT AGACACGATG GAGGACGACA CCTACCGGGA GTTGAAGGAG
AGGAGCGGAA ACGGCGTGAG GAAGCACTTC CTAGATGGGC TTGGGCAGTT GAGGAGGAGA
CTGCAAGCGC TAGCGCGGTG GTATAGGTTG CCGTATTTAG AGGAACGGTT GTACAGTATG
GTCTGCCCGA GATGTGGCAC GAAATTGTAG
 
Protein sequence
MLNNGVVINA TREIIKLARE HQAAIVVDTM EDDTYRELKE RSGNGVRKHF LDGLGQLRRR 
LQALARWYRL PYLEERLYSM VCPRCGTKL