Gene Pisl_0640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0640 
Symbol 
ID4616446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp584869 
End bp585627 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content44% 
IMG OID639783734 
Producthypothetical protein 
Protein accessionYP_930161 
Protein GI119872154 
COG category[S] Function unknown 
COG ID[COG1650] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000906628 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.000483449 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTATGTAA TAGTGGCATC TCTTAACGAT CCTGTATCAC GCATATTTCT CGACGTAATT 
GCGCCTACGC CGTTGGTTAA GACTGAGGGC AATATAGAAA TTAGAAAGTT TGTGGACTTC
CCAGTTGTGG TGTATAGAGG AGAGCCCACT GACTTCAGCC GCGAGGACAT ACTGGCCTCT
TTTGGAAAAT ATGCCATTTT TATATCTAGA CATGAGATGG CGAATCCAAG GCCGTTGTTT
ACGGTTCACA CTCCTGGCAG TTGGCCCGAC GTATCTATAT CAAATCCGCC ACTTACATCT
TCAATATTTA GAACTTTGTG TAAATTAGCG TACGAGCCCT ACACATGCGC CTTTGAGGCG
ACGCACCACA CTCCAAATAC CTCTTACATA TCTGCCACAT TTGTAGAAGT TGGAAGTACA
GAAAACGAGT GGAAGGACAG GAAAGCAGTT GAGACTTTAG CCCAGGCGGT TGAAGAAGTA
TTAAACAGTC AGATAAAGCC AAACACGCCG GCTATGGCCA TAGGCGATCT CCACTACGTG
ACTGTGACAG ACCCAGTGTT AAAAGGCGAG TTAGACCTAG GCCATGTGAT TCCTAAGTAT
GTAGATATCT CTCTCCAAGT AGTACAAAAC GCCTACCTAA AACATACCAC GCCTATAGAA
AGAGCTATAT TGTTCAAAAA GAATGTAAAA AACCCTGCCA GAAGCGAGAT AATAGAGTTT
CTCAAGTCGC GTGGTGTCGA AATTATCACA AAGGGGTAA
 
Protein sequence
MYVIVASLND PVSRIFLDVI APTPLVKTEG NIEIRKFVDF PVVVYRGEPT DFSREDILAS 
FGKYAIFISR HEMANPRPLF TVHTPGSWPD VSISNPPLTS SIFRTLCKLA YEPYTCAFEA
THHTPNTSYI SATFVEVGST ENEWKDRKAV ETLAQAVEEV LNSQIKPNTP AMAIGDLHYV
TVTDPVLKGE LDLGHVIPKY VDISLQVVQN AYLKHTTPIE RAILFKKNVK NPARSEIIEF
LKSRGVEIIT KG