Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0628 |
Symbol | |
ID | 4617915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 575469 |
End bp | 576095 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639783722 |
Product | hypothetical protein |
Protein accession | YP_930149 |
Protein GI | 119872142 |
COG category | [S] Function unknown |
COG ID | [COG2860] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000261982 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0000034229 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTACGCAG AGCTTATAGT CGAGATTTTA AATTACGTAG GTATAGTGGC ATTTGCAGTA TCGGGCGCAT TGAAAGCAGG CGAGAAGGAT ATGGATCTGC TCGGGTTTAT CGTGTTGGGG TTTTCGACGG CGCTAGCTGG CGGTATAATT AGAGATGTAT TGTTGGGCAG AGTTCCTCCG GCGAATCTAA TGTATATTCC ATATCCGGCT ACTGCGATAA TAGCATCGTT AGTAACATTT GTCTTATATC CTCAAGTGAG GAGGTATAGA GACGTCGTCT TATATCCAGA CGCCCTGGGA TTAGGCGCAT TTGCGGCAAT AGGCGCAGAT ATTACAGCTA CTTACTGCTC CACCAACAGG ATAGAGAGCT GTTGGCTACT TGTTATAACG CTCTCTTCAA TAACAGCAGC AGGCGGGGGC GTAGTCCGCG ACATACTTGC TGGGGAAGTC CCAGTGGTGT TAAGACGTGA GGTTTATGCA TCTGCGGCTG CTATCGGCGG CGTATTATAT CTAGCTTTGT ATCCACTGGG CAGAGAAATT GCCATGTTAA CCACAATTAT TGCAGTAACC GCTATTAGAG TAGTTACATT ATTAAAAGGT TGGGAACTCC CCCGCGTTAG GCTGTAG
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Protein sequence | MYAELIVEIL NYVGIVAFAV SGALKAGEKD MDLLGFIVLG FSTALAGGII RDVLLGRVPP ANLMYIPYPA TAIIASLVTF VLYPQVRRYR DVVLYPDALG LGAFAAIGAD ITATYCSTNR IESCWLLVIT LSSITAAGGG VVRDILAGEV PVVLRREVYA SAAAIGGVLY LALYPLGREI AMLTTIIAVT AIRVVTLLKG WELPRVRL
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