Gene Pisl_0623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0623 
Symbol 
ID4616896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp571487 
End bp572551 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content44% 
IMG OID639783717 
Productglycosyl transferase family protein 
Protein accessionYP_930144 
Protein GI119872137 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000260018 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.000000106889 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTGAGT CAATTCTGTT CGCCCCATTC ATAGTATTGG CTCTCGCAGG GCTAATGAGG 
GAGTACCTAT TCTGGAGAAA CGAGACGGCA TCCCATAGAC AGAGTTGTAG AAAAATCAGC
GTGATTATAC CTATGAGAGG TGTATATTCT TGGACCGAGG ACAACTTAAG GGCTATAACT
TCTCAAAAAA CCGACGTAGA GATAGAGTAC ATATTTGTTG TAGATTCTCC AGAGGATCCA
GCCTATGTAC TTGCGCAGAA GTTTGGTAGA GTTATAATAA GCCAAGGAGA GGGGAAAAGC
GCAGCGCTTG CGACAGGTCT AAAGGTGGCA AAAGGCGACT GTATAGTTTT TGCAGATGAC
GACATCAAGC CTAGAGAGAA TTGGCTTGAG TCATTAACGG CCCCCCTTTC TTTATACACG
GCCGTAACTA CGTATAGGTG GTATGTTGGT CAAGGGCTCT GTCATAAGGT GAAACTAGCC
ATCAGCAACA TGGGATTTCC TGCCATGATG GATAAAAGAT CTAGATTTGT CTGGGGTGGC
TCCACGGCTT TTAAAAGAGA GTTTGCCGAG AGAGTTAAAC TCGCTGAGAG ATTGCCTAAG
TATATAAGCG ATGATTACGC AGTGTATTCT GCCATAAAAG AAGTCGGCGG CACCATATGG
TTTGCTAAAT CGGCTATAGC GCCTACGCCA GACCCACAGT GTAAAATTCA GGAAGCTTTT
CACTGGGGGG TGCGTCAGAT ACTTATGGTG AAGTGGCACG CACGCTTAGG TTGGTATATA
GGACTTATGA TCTACACGCT AGGCTTTTTT ATATCTGTAG TATTACCTAT AGTAGGCGTT
TTAATCCGCA ATTATTGGTT GCTGCCGGGA CTTGCACTAC ACCCGATAAA CCTTGCAAAA
GATTTTATAA GAGCTAGAGG AGTGAAGAAA TATACGGCTA TACAAGTTAG TGTTGTTGAT
ATCGTCGCCA CTTGGGCTAT AGGTAATTTT ATAATTCCCA CAGCGCTTTG GGTTTCTGTT
TTTACAAAAT GTATAAATTG GAGAGGTCGC AAGATATGCC GGTGA
 
Protein sequence
MVESILFAPF IVLALAGLMR EYLFWRNETA SHRQSCRKIS VIIPMRGVYS WTEDNLRAIT 
SQKTDVEIEY IFVVDSPEDP AYVLAQKFGR VIISQGEGKS AALATGLKVA KGDCIVFADD
DIKPRENWLE SLTAPLSLYT AVTTYRWYVG QGLCHKVKLA ISNMGFPAMM DKRSRFVWGG
STAFKREFAE RVKLAERLPK YISDDYAVYS AIKEVGGTIW FAKSAIAPTP DPQCKIQEAF
HWGVRQILMV KWHARLGWYI GLMIYTLGFF ISVVLPIVGV LIRNYWLLPG LALHPINLAK
DFIRARGVKK YTAIQVSVVD IVATWAIGNF IIPTALWVSV FTKCINWRGR KICR