Gene Pisl_0617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0617 
Symbol 
ID4616467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp565415 
End bp565960 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content44% 
IMG OID639783711 
Producthypothetical protein 
Protein accessionYP_930138 
Protein GI119872131 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.000000000547661 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATGTACA AATTGGCCCT CCTATTCATA ATGATACTGG TCTTCACAGT CTGGGGTGGA 
GTTTTGTTAG TTAAGGGGCC TTCTGGTAAC TACACAGCCG CCGTTATAAA TGGAACTTTA
GTAGTTGATG GACAAAGCAT ACCCTTGCCA CAGAAGGTTA GTTGGTACTT CAATGGGTCT
TACACTGTGT ATGGCATTTA TTATGGCAAC CCTCAATGCC TACTATCGCT CTGGCCAGAT
AGGCCAGAGT TCTACATTAC ATGTACTGTA GGTACAGATA TCGCCATAGT AGTACTAAAG
GATCCAAAGG CAAAGATCAT ATGCAGAGAT AAAAACAACA TACTCACCCC TACAACGGCA
ACCCAACACC TAGAGATGTA TAGAACAAGA AGCTTGTATG TGGAGTGTAA ATCTAACTTC
TCTGCCACAG TTTCTACGCC GTCTCTTCTT ATAGCTGTAA TGGCCGGGGC AACGGCCGCT
TCTATGAGTC TTTTCGTGGC GCTGAGTGTT TTACTACTCC GCAGAGCCCT CAAAGAGGAG
CATTAA
 
Protein sequence
MMYKLALLFI MILVFTVWGG VLLVKGPSGN YTAAVINGTL VVDGQSIPLP QKVSWYFNGS 
YTVYGIYYGN PQCLLSLWPD RPEFYITCTV GTDIAIVVLK DPKAKIICRD KNNILTPTTA
TQHLEMYRTR SLYVECKSNF SATVSTPSLL IAVMAGATAA SMSLFVALSV LLLRRALKEE
H