| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0616 |
|---|
| Symbol | |
|---|
| ID | 4616392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | + |
|---|
| Start bp | 564605 |
|---|
| End bp | 565447 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639783710 |
|---|
| Product | CBS domain-containing protein |
|---|
| Protein accession | YP_930137 |
|---|
| Protein GI | 119872130 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3448] CBS-domain-containing membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.000000000848956 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGTTTAGAA GGCCTGTAAT AGAGTTTGCT ACTAGAAACG TTGTTACAGC AAGTGAGAAG
GATAAAGTGC TCAATGCTAT GAAGACTATG GTTAACCTAG ATATCAGACG GTTGCCTATT
GTACGTGGCG ATAAGTTAAT AGGCATAATA ACAATGCTTG ATATATTAGA TGCGATATAT
TCCTGGATTA GCGATAAAAA TACCGAGGGC TCTCTGTATA GTGATATCTA TATGAAGAGC
GTGATTGAAA TAGGGACTAG AAGTGTAATT TCTGCACGTC CTGAGACCCC ATTAGGCGAG
GTGATAGCAC TTTTCCTCCG CCATAACTTT GGCTCTATGC CAATAGTAGA TGAGACAGGG
CGGTTAGTTG GCATATTTAC AGAGTGGGAT GTGTTAAAGG TCGCGTCACA ACTAGACTTC
CCACACAGAG TTCGCGATGT AATGACGAGA ATAGTCTATG TGTTGACGCC TTATTCTACT
GTAATGGACG TGTTAGAGGG TATTACAATC TATAAATTCA GGAGGTATCC AATAGTGGAC
GAAACAGGCA AAGTGATAGC GATGTTACAC GCAAAAGATG TACTTAGATA TTTTGCTTCT
GACGAAGTTA TTGAGAAAAT CAAGCAGGGA GCTGTAGAAG ATATAGTGAG TAACTATGCG
ATAAATATTG CAAAATCGCC CATATTTGTA GCTAAGCCAA ACGACCCAGT TATAGACGTC
GTCAAGAGAA TGCTTGAGTA TGATGTCGGC GGAGTCCCTG TAGTTAACGA GGAGGGCACG
GCGGTTATAG GTATGGTGAC TGAAAAAACC TTAATGCTCC TCTTTGAGGG CTCTGCGGAG
TAG
|
|---|
| Protein sequence | MFRRPVIEFA TRNVVTASEK DKVLNAMKTM VNLDIRRLPI VRGDKLIGII TMLDILDAIY
SWISDKNTEG SLYSDIYMKS VIEIGTRSVI SARPETPLGE VIALFLRHNF GSMPIVDETG
RLVGIFTEWD VLKVASQLDF PHRVRDVMTR IVYVLTPYST VMDVLEGITI YKFRRYPIVD
ETGKVIAMLH AKDVLRYFAS DEVIEKIKQG AVEDIVSNYA INIAKSPIFV AKPNDPVIDV
VKRMLEYDVG GVPVVNEEGT AVIGMVTEKT LMLLFEGSAE
|
|---|
| |