Gene Pisl_0609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0609 
Symbol 
ID4616566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp559110 
End bp559979 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content45% 
IMG OID639783703 
Product4-hydroxybenzoate polyprenyltransferase, putative 
Protein accessionYP_930130 
Protein GI119872123 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID[TIGR01475] putative 4-hydroxybenzoate polyprenyltransferase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00000000295673 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCTATTCG ACCCTGAGGT TGTCGGCACA ACTACAATAA GAATCCTCAG GTTTATACGA 
GTAGAACACA CTATTTTTAC CCTTCCCATG GCATATGCCG CGGCACTACT AACAGGTGGA
GTAATCGACT TTTGGAAAGC CGTATTTATA GGACTTGCTG TTTTTGGCCT TAGAACTGCT
GGGATGGCTT GGAATAATAT TGCAGACTAC CCTATAGACA AGCTGAATCC TAGAACTCAA
AGACGGATGC TTGTATCTGG TAAAATAAGC TTCAGAGAGG CCTATGGCGT CTTCCTCTTC
GGCGTTGCCA TTTTTATACT TTCAGCGATG GCGCTTGGAA AATGGCCTTT GACGCTTTCG
TTGCCATATC TGGCTGTCGT CATGACGTAT CCCTACGCGA AGAGGGTTCA CTGTATTCCT
CATTTACACC TAGGCTTAGT TTACGCATTA GTACCCCTGG GCGCGGCTAT TGCGACATAT
CCAGACGATA TACAAATAGC TTTAGCAAAA ACACCATGGA TATTAGTTGT AGCTTCGGCA
TTGTGGGTCG CCGGATTTGA CGTCATGTAT TCAAAGGGAG ATTACGAATT TGATAAAAGA
CAAAGGCTGG GGAGTATACC GGCGTGTTTT GGATTAAAAG CTGCCGATAT AGTAACTGCT
CTCCTAATGT CCGCGTCTGC AACTTTGTAT ATTGTCAATT ACATAAGCTA CGGACTTAAC
ATATGGGGGC TTGTTCTAAC GTCGATAGGG GCTTTCTTGG AAATATACTC AGCAGTACTA
GGCATAAGAG GAGACGTAGC GCGCGGATTT AACTTAAACC TCGCCGTAGG CATCTTTATA
CCTTTTGGAA TTTTCGTCGG GTACTACTAG
 
Protein sequence
MLFDPEVVGT TTIRILRFIR VEHTIFTLPM AYAAALLTGG VIDFWKAVFI GLAVFGLRTA 
GMAWNNIADY PIDKLNPRTQ RRMLVSGKIS FREAYGVFLF GVAIFILSAM ALGKWPLTLS
LPYLAVVMTY PYAKRVHCIP HLHLGLVYAL VPLGAAIATY PDDIQIALAK TPWILVVASA
LWVAGFDVMY SKGDYEFDKR QRLGSIPACF GLKAADIVTA LLMSASATLY IVNYISYGLN
IWGLVLTSIG AFLEIYSAVL GIRGDVARGF NLNLAVGIFI PFGIFVGYY