Gene Pisl_0606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0606 
Symbol 
ID4616883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp556904 
End bp557584 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content52% 
IMG OID639783700 
Producthypothetical protein 
Protein accessionYP_930127 
Protein GI119872120 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.659537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.000000623069 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCAAA CATACAGAGC GCCGAAGGTC AAAATCCCAT GGCATCTCGT CGAGGAGAGG 
CCAGACGTCT TAGACACTGT AACGCGTATG TATTTAGCCG TCGAGGAATA TGTAAAGAGA
CTGCTAAAGG AGTTGACGGG GCAAGAGGAG CCGAGACTCA CGGCGGAGGA GTTGGACAGA
CTCCTCACGC TAGACAGGCG GGAGTTGGCG CACGGGATTA TTGAAGAGAC GTTCCACAAG
TACGGACTTA AGAAGTACCT TGCAGAGTGG GCTAAATTCC TTTGGCGCGA CGTAGTGTTC
CATCGGGCGG TTCCGCTCTA TGCCCAGTTG AGAGTCAAAG ACGAGAGAGA CGTGGGCAAA
GCCGTCAAGT TGAAGAAGGG TAACATTGCT TGGATCAGAA AGCGGTTGGA AGAAGGCGCC
AAGTCGAAAC TCGCTTTCCT CGGTGTGGAG GTGAAGAGGA GCAAGAAGGA ATCAACATAC
GGAAAGCTCT ATATAGCGCT TGTCTTCGCC CGTGAAGCGA CGCCGGTGGA GCTCAAGGCG
ATAGTTACCG TTGATATTAA CCGTCTTGAC TATGGCATAA TAGTAGGCCT TCTCGTGGAG
GGGAAGTTGA GACAGACGTT GAGACTTCCA GATGCGTCTG TAACTAGGGA GTCGGGGGAG
ACTTCACGAG GAGATAAGTA G
 
Protein sequence
MSQTYRAPKV KIPWHLVEER PDVLDTVTRM YLAVEEYVKR LLKELTGQEE PRLTAEELDR 
LLTLDRRELA HGIIEETFHK YGLKKYLAEW AKFLWRDVVF HRAVPLYAQL RVKDERDVGK
AVKLKKGNIA WIRKRLEEGA KSKLAFLGVE VKRSKKESTY GKLYIALVFA REATPVELKA
IVTVDINRLD YGIIVGLLVE GKLRQTLRLP DASVTRESGE TSRGDK