Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0606 |
Symbol | |
ID | 4616883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 556904 |
End bp | 557584 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639783700 |
Product | hypothetical protein |
Protein accession | YP_930127 |
Protein GI | 119872120 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.659537 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.000000623069 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCCAAA CATACAGAGC GCCGAAGGTC AAAATCCCAT GGCATCTCGT CGAGGAGAGG CCAGACGTCT TAGACACTGT AACGCGTATG TATTTAGCCG TCGAGGAATA TGTAAAGAGA CTGCTAAAGG AGTTGACGGG GCAAGAGGAG CCGAGACTCA CGGCGGAGGA GTTGGACAGA CTCCTCACGC TAGACAGGCG GGAGTTGGCG CACGGGATTA TTGAAGAGAC GTTCCACAAG TACGGACTTA AGAAGTACCT TGCAGAGTGG GCTAAATTCC TTTGGCGCGA CGTAGTGTTC CATCGGGCGG TTCCGCTCTA TGCCCAGTTG AGAGTCAAAG ACGAGAGAGA CGTGGGCAAA GCCGTCAAGT TGAAGAAGGG TAACATTGCT TGGATCAGAA AGCGGTTGGA AGAAGGCGCC AAGTCGAAAC TCGCTTTCCT CGGTGTGGAG GTGAAGAGGA GCAAGAAGGA ATCAACATAC GGAAAGCTCT ATATAGCGCT TGTCTTCGCC CGTGAAGCGA CGCCGGTGGA GCTCAAGGCG ATAGTTACCG TTGATATTAA CCGTCTTGAC TATGGCATAA TAGTAGGCCT TCTCGTGGAG GGGAAGTTGA GACAGACGTT GAGACTTCCA GATGCGTCTG TAACTAGGGA GTCGGGGGAG ACTTCACGAG GAGATAAGTA G
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Protein sequence | MSQTYRAPKV KIPWHLVEER PDVLDTVTRM YLAVEEYVKR LLKELTGQEE PRLTAEELDR LLTLDRRELA HGIIEETFHK YGLKKYLAEW AKFLWRDVVF HRAVPLYAQL RVKDERDVGK AVKLKKGNIA WIRKRLEEGA KSKLAFLGVE VKRSKKESTY GKLYIALVFA REATPVELKA IVTVDINRLD YGIIVGLLVE GKLRQTLRLP DASVTRESGE TSRGDK
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