| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0602 |
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| Symbol | |
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| ID | 4617606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | + |
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| Start bp | 552674 |
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| End bp | 554311 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639783695 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_930123 |
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| Protein GI | 119872116 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.497567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000000266408 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATAAGT CTCTAGCTGT AGGAATAGTT GTTTTAGTTG TCGTGTTGGC AGTTATAGCA
ATATTCCTAT CTCAACAACA AGCCCCTGCG CCCCGTCCGT TGCCACAGTC TTCAAGTCCC
ACTACAACGC AGACTCCTAT TCCCACCACG CCGAAGTCTT CTCCCACTTC TACAACGCCG
CAACCAACTT CGCTTACGAT CGGAGTGACA GATAAAGTCA CCGACTTAGA TCCAGCGAAC
GCCTACGACT TCTTTACATG GGAAATTTTC TACAACACAA TGGCGGGGCT CGTTAGATAC
AAGCCGGGAA CAACAGAGCT AGAGCCCGAC CTAGCTGAGA ATTGGACGGT GCTAGAGGGG
GGCAAGGTGT GGGTGTTTAA ACTAAGGCCA AATCTTAAGT TCTGTGACGG TACCCCGCTT
ACTGCCAGTG ATGTAAAGCG GTCTATCGAG CGCGTAATGA AGATAAACGG GGACCCTGCT
TGGCTTGTCA CAGATTTTGT AGAAAAGGTA GAGACACCCA ACGCAACTAC AGTGATCTTC
TACTTGAAGA CACCTGTCTC CTACTTCCTA GCGCTTGTAG CAACGCCGCC TTACTTCCCC
GTACATCCAA AATATGTACC CGATAGAATC GACTCGGATC AGACGGCAGG CGGCGCAGGG
CCCTACTGTA TAAAGTCATT TGTGAGAGAC CAACAGATAG TGCTAGAGGC AAATCCATAC
TACTATGGGC CTAAGCCGCA GATATCTAAA GTTGTCATAA AGTTTTATAA AGACGCTACG
ACGCTGAGAC TTGCCCTAGA AAGAGGCGAG GTCGATATAG CCTGGAGGAC TCTTAATCCG
CCTGATATTG AGGCGCTAAA GGCATCAGGC AAGTTTAAAA TCGTCGAAGT GCCTGGTTCT
TTTATACGTT ACATAGTACT TAATCTCAAT ATGCCAGAGC TAAAGGACGT TAGAGTAAGA
CAAGCGCTGG CCGCCGCCGT GTGTAGAAAG GACATTGTGC AGACGGTATT CCGTGGCGCT
GTTACGCCGC TTTATACTCT AATACCAGAG GGAATGTGGG GTTCTTACCC AGTCTTTAAG
GAGAGGTACG GGGACTGTAA CATAAGCCTA GCCAGATCCC TTCTACAGCA GGCTGGGTAT
AGCCAGAGCA AGAAACTGTC GATCGAGCTC TGGTATACGC CGACACACTA CGGCGATACC
GAAAAGGATC TTGCAGCAGT GTTGAAAGAG CAGTGGGAAG CCACAGGGCT TGTTTCTGTT
ACCGTGAAGT CGGCCGAGTG GGCTACATAT GTACAGCAAC TTAGAAGCGG CGCTATGATG
GTATCTCTGC TGGGTTGGTA TCCCGACTAC CTGGATCCAG ATGATTACAC AACGCCGTTT
CTCAAAAGCG GCTCTAACAA ATGGTTGGGT AATGGCTATA GCAATCCAAA AATGGACGAG
ATACTCACCA AAGCCTCTGT TGAGGAAAGT CGGTTAGTTA GAGAACAGTT ATATAGACAG
GCACAACAAC TGTTGGCGGA AGATGTGCCC ATAATTCCTC TTGTACAAGG TAAGCTGTTT
ATAGCAACGA AGCCAAATAT ACAAGTCGTA GTAGATCCGA CAATGATCCT GAGATATTGG
GCAATAAAAA TAGCCTAG
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| Protein sequence | MNKSLAVGIV VLVVVLAVIA IFLSQQQAPA PRPLPQSSSP TTTQTPIPTT PKSSPTSTTP
QPTSLTIGVT DKVTDLDPAN AYDFFTWEIF YNTMAGLVRY KPGTTELEPD LAENWTVLEG
GKVWVFKLRP NLKFCDGTPL TASDVKRSIE RVMKINGDPA WLVTDFVEKV ETPNATTVIF
YLKTPVSYFL ALVATPPYFP VHPKYVPDRI DSDQTAGGAG PYCIKSFVRD QQIVLEANPY
YYGPKPQISK VVIKFYKDAT TLRLALERGE VDIAWRTLNP PDIEALKASG KFKIVEVPGS
FIRYIVLNLN MPELKDVRVR QALAAAVCRK DIVQTVFRGA VTPLYTLIPE GMWGSYPVFK
ERYGDCNISL ARSLLQQAGY SQSKKLSIEL WYTPTHYGDT EKDLAAVLKE QWEATGLVSV
TVKSAEWATY VQQLRSGAMM VSLLGWYPDY LDPDDYTTPF LKSGSNKWLG NGYSNPKMDE
ILTKASVEES RLVREQLYRQ AQQLLAEDVP IIPLVQGKLF IATKPNIQVV VDPTMILRYW
AIKIA
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