| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0599 |
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| Symbol | |
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| ID | 4616766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | + |
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| Start bp | 547973 |
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| End bp | 549214 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639783691 |
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| Product | putative pseudouridylate synthase |
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| Protein accession | YP_930120 |
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| Protein GI | 119872113 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1258] Predicted pseudouridylate synthase |
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| TIGRFAM ID | [TIGR01213] conserved hypothetical protein TIGR01213 |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00101881 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0000193518 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGACGTCG TGGATATACT AGAAAAATCT CTTGAAATTC TCAAGGCCTA CCCACTTTGT
GACTCTTGTC TTGGTAGACT TTTTGCACAA ATGGGTTACG CGCTGGAGAA TTGGGAAAGG
GGTTTTAGTA TAAAGACGAT GTTACATATG AAATTAGTCA CACTTTTCCG CCAAGGCGTT
GATGTTACTA CAGATTTAAA AAGCCTAGCT CGTATACATA AACCTACTAG GCGCTTTCTC
TCAACTATTG GAATTACTGT GGAGGAGGCT CAGTGTTATA TATGCGGAGG TCTTCTCTCG
AATGTTGAAC GTTTTGCTAA AGAGGCTGTA TCAAAAGTCG ATGGAATAGA GTTTGAAACT
TTTGCAGTAG GTACCACAAT ACCAAGAGAA ATTCTTGAAA GAGAGTCAGA GGTTGTAAAA
AAATTCCTCG TCTCTACAGG AGAATCTATT AAACATGAGA TTAATAGGAG AATCGGCAAG
GAGCTTTTAA GACTACTAGG CAGACGCGTT GATAAACAAC GGCCAAATAT CTTAATAAAG
ATAGATTTGA TAAACGGTAA GATAGATATA GTGAAGAATC CTCTTCTTAT AGAAGGGGTA
TATCTAAAAC TTAGCCGGAG GATTTCTCAA GCTAAGAAAT TCGGTAATGT AAAATCCTCC
TTGTTGGAGA AGCTACAGTA CATCAGGGAT ATGTATGGCG GCGTAGAACA CATAATTCAT
GTATCAGGGA GGGAGGATAG CGACGCTAGA ATGTTGGGGC CCGGCAGACC TCTTGTTGTG
GAAATCAAAC AGCCGACTAA ATACAAAGGA CTCCCACATC TATACTCCGA CGGGGACGTG
ATCTTTATCC CACTTGGTTT TACCACTAGA GATGAAGTCA GAAAGCTAAA AGAAAAGGCT
AAGACAGATA TAAAATTATA TCGTGCATTA GTATACTCCG ATCGCCCGCT TTCTGAGGAG
GAGCTTAGAA AACTTGCTGA ACTTTCGGGC AAGACAGTAG TCCAATACAC ACCGCGTCGA
ATTAAGAGAC TTAATCCAAG AAAGAAGAGG ACGAGGATGG TTTATGAAAT CGTTTGGCGT
TTTATATCGT CTCACGTCTT TGAGCTTTAT GTAAGATGTC AGGGTGGGCT CTATGTAAAA
GAGTTTATTC ACGGCGATGG AGGTAGAACT ACGCCAAGCG TTGCTGAAAT TTTAAACACG
TACTTAGAAG TGTTAGAGCT TGACGTGCTA TCTATAGAAT AG
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| Protein sequence | MDVVDILEKS LEILKAYPLC DSCLGRLFAQ MGYALENWER GFSIKTMLHM KLVTLFRQGV
DVTTDLKSLA RIHKPTRRFL STIGITVEEA QCYICGGLLS NVERFAKEAV SKVDGIEFET
FAVGTTIPRE ILERESEVVK KFLVSTGESI KHEINRRIGK ELLRLLGRRV DKQRPNILIK
IDLINGKIDI VKNPLLIEGV YLKLSRRISQ AKKFGNVKSS LLEKLQYIRD MYGGVEHIIH
VSGREDSDAR MLGPGRPLVV EIKQPTKYKG LPHLYSDGDV IFIPLGFTTR DEVRKLKEKA
KTDIKLYRAL VYSDRPLSEE ELRKLAELSG KTVVQYTPRR IKRLNPRKKR TRMVYEIVWR
FISSHVFELY VRCQGGLYVK EFIHGDGGRT TPSVAEILNT YLEVLELDVL SIE
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