| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0597 |
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| Symbol | |
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| ID | 4617621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | + |
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| Start bp | 546184 |
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| End bp | 547485 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639783689 |
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| Product | GTP-binding signal recognition particle |
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| Protein accession | YP_930118 |
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| Protein GI | 119872111 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000223356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00000371893 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAGGCGC TTGGCGAAGT ATTTAGTAAG CTTGTCGAAA AAATTAGAGG TGTTAGTTAT
ATAGACGAAG CAACGTTACA AGAGCTTTCA AGAGAGATTC AAAGAGCGCT TCTTAAAGCC
GACGTTCCTC TAGATATGGT AAAGACGTTT ACTGAAAATG CAGTAAAGAG AATGCGTGAG
GAGAAGCCGC CTGCCGGTAT ACCGCCGAGG GAATACGTCT TATATATCCT ATACGATGAA
TTAGTAAAGC TGTTGGGCGG GGAGCAACCC GCCGAGTTTA AACCAGTTAA AAAACCCTAT
TTGGTGCTCC TCCTAGGTGT CGAAGGAAGC GGGAAAACAA CGACAGCCGC AAAATTAGCT
AGATATTTGG TAAAGAGAGG ATATAGAGTG GGGCTTGTGG AGACAGATAC TATAAGACCC
GCCGCGTTTG ACCAGTTGAA ACAACTTGCG GAAAAGATAG GTGTCCCTTT CTATGGCGAA
AGAGATAGTA AAGATGCTGT AGAAATCGCA CGTCGCGGTG TCCAAAATTT CAAAAATATG
GACGTGGTAA TTATAGACAC TGCAGGGCGT CATAAAAACG AAGAGGCTCT ACTACAAGAG
GTAAAGATGA TATATGAAGC TGTAAACCCC GACGAGGTTA TACTTGTAAT AGATGCGACA
GTTGGTAAAC TAGCGGCTGC ACAAGCGGAG GCCTTTATGA AATATCTACC GATACATTCG
GTAATAATTA CAAAGATGGA TAGCACTGCG AGAGGCGGCG GCGCATTAGC CGCTGTTATT
AAAACGGGGG CTAGGGTGAA GTTTATAGGC GTTGGCGAAG ACGTAGACGA ATTCGATTTG
TTTAACCCAC GTAAGTTTGT GGCAAGAGTC CTCGGGATGG GCGACCTAGA CGCGTTAGTA
GAAAAGATAA AAGCCGTATT TGAAGAAGAG AAGGTTCTAC AGGAGATAGA GTCTGGGAGA
TTAGATCTTT TAACTTTTAA AAAACAGATA GAGGGTTTGT TAAAACTTGG GCCGCTGAGT
AAGGTACTTC AACTGTTGCC AGGGGGTTTT GCCGCAAAAA TCTCGGAGGA GCAAGTTGAA
CTTTCGCAAA AGAATCTAAA GAAGTGGTAT GCCATATTAA GTTCTATGAC AATAGAAGAG
TTAAAGAACC CAGATATTCT AAATGCTTCA AGAATCCGCA GAATAGCGCT TGGCGCTGGC
GTTACACCTA AAGACGTAAA AGAGATGCTA ACTGTATATG AAAACCTGAA GAAGATGTCT
AAGACTTTAA AGAGACAGCT GAGAATGAGG ATACCAAAGT GA
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| Protein sequence | MKALGEVFSK LVEKIRGVSY IDEATLQELS REIQRALLKA DVPLDMVKTF TENAVKRMRE
EKPPAGIPPR EYVLYILYDE LVKLLGGEQP AEFKPVKKPY LVLLLGVEGS GKTTTAAKLA
RYLVKRGYRV GLVETDTIRP AAFDQLKQLA EKIGVPFYGE RDSKDAVEIA RRGVQNFKNM
DVVIIDTAGR HKNEEALLQE VKMIYEAVNP DEVILVIDAT VGKLAAAQAE AFMKYLPIHS
VIITKMDSTA RGGGALAAVI KTGARVKFIG VGEDVDEFDL FNPRKFVARV LGMGDLDALV
EKIKAVFEEE KVLQEIESGR LDLLTFKKQI EGLLKLGPLS KVLQLLPGGF AAKISEEQVE
LSQKNLKKWY AILSSMTIEE LKNPDILNAS RIRRIALGAG VTPKDVKEML TVYENLKKMS
KTLKRQLRMR IPK
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