Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0596 |
Symbol | |
ID | 4617618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 545312 |
End bp | 546157 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639783688 |
Product | putative circadian clock protein, KaiC |
Protein accession | YP_930117 |
Protein GI | 119872110 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00351856 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0000057975 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTTTTC AGGAACAGTA CTATGAATAC CAGGATTATT ACCCAGTATA TGATAACAGA GCGCCCACAG GGATTTGGTA TATCGACCAG TTACTACAGG GCGGCTTTAG AAAGGGAGAG ATCTATTTAG TTGCAGGAGA GGCAGGCCAG GGGAAGACAA TATTTAGTCT TCAATTTCTA AAAACCGGGG CTGAGATATA TGACGAGCCC GGGCTCTATA TTACAATAGA CGAACCCTCT GAGGATGTAA AACGTGGAGT AAAAGACTCT CTTGGCTGGG ATCTCGACAT ACTTGAAAAC CAGAATAAGC TAATATTTGT AGACCTCAGG ACGCATTTTA GGACGTACGC TAAAGAGGAA AAGGTAACTG CAGATCCACG AGATATTGCT AAAATAATTC TTGAATATGT CAAAAAATTT GGAATAAAGA GACTTGTCAT AGATCCAATA GCTCCCTTGA TTATCACATC GCATACAGAC ATCTTATGGG TGAGAGAGTA TATGAGGGAG CTTGTATTCC AGCTGAGAAA GATAAAAGAC ATAACCACAC TGCTGACCTC TGAGATTCCT ACTGGTGAGA ATAAAATAAG CCGCTTTGGT GTAGAGGAGT ATTTAGCAAG CGGCGTGATA AAGCTTGAGC TTATGGAATA CAGAGGCTTT GTATTTAGAG TTATGTTTAT AAGAAAGATG AGGTGGACAG CGGTGCGGCC ACAGAAACTT GTCTTTGAGA TATATCCCCA CTATGGCATA TACATCTTAG ATCGTCTCGA GAATTTTATG AAACAAATAG ATATTTGGTA CGCGACGTTA AGTCAGCAAG CGCAAGCGCC ACCGGTGACA CAATAA
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Protein sequence | MSFQEQYYEY QDYYPVYDNR APTGIWYIDQ LLQGGFRKGE IYLVAGEAGQ GKTIFSLQFL KTGAEIYDEP GLYITIDEPS EDVKRGVKDS LGWDLDILEN QNKLIFVDLR THFRTYAKEE KVTADPRDIA KIILEYVKKF GIKRLVIDPI APLIITSHTD ILWVREYMRE LVFQLRKIKD ITTLLTSEIP TGENKISRFG VEEYLASGVI KLELMEYRGF VFRVMFIRKM RWTAVRPQKL VFEIYPHYGI YILDRLENFM KQIDIWYATL SQQAQAPPVT Q
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