Gene Pisl_0596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0596 
Symbol 
ID4617618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp545312 
End bp546157 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content41% 
IMG OID639783688 
Productputative circadian clock protein, KaiC 
Protein accessionYP_930117 
Protein GI119872110 
COG category[T] Signal transduction mechanisms 
COG ID[COG0467] RecA-superfamily ATPases implicated in signal transduction 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00351856 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0000057975 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTTTTC AGGAACAGTA CTATGAATAC CAGGATTATT ACCCAGTATA TGATAACAGA 
GCGCCCACAG GGATTTGGTA TATCGACCAG TTACTACAGG GCGGCTTTAG AAAGGGAGAG
ATCTATTTAG TTGCAGGAGA GGCAGGCCAG GGGAAGACAA TATTTAGTCT TCAATTTCTA
AAAACCGGGG CTGAGATATA TGACGAGCCC GGGCTCTATA TTACAATAGA CGAACCCTCT
GAGGATGTAA AACGTGGAGT AAAAGACTCT CTTGGCTGGG ATCTCGACAT ACTTGAAAAC
CAGAATAAGC TAATATTTGT AGACCTCAGG ACGCATTTTA GGACGTACGC TAAAGAGGAA
AAGGTAACTG CAGATCCACG AGATATTGCT AAAATAATTC TTGAATATGT CAAAAAATTT
GGAATAAAGA GACTTGTCAT AGATCCAATA GCTCCCTTGA TTATCACATC GCATACAGAC
ATCTTATGGG TGAGAGAGTA TATGAGGGAG CTTGTATTCC AGCTGAGAAA GATAAAAGAC
ATAACCACAC TGCTGACCTC TGAGATTCCT ACTGGTGAGA ATAAAATAAG CCGCTTTGGT
GTAGAGGAGT ATTTAGCAAG CGGCGTGATA AAGCTTGAGC TTATGGAATA CAGAGGCTTT
GTATTTAGAG TTATGTTTAT AAGAAAGATG AGGTGGACAG CGGTGCGGCC ACAGAAACTT
GTCTTTGAGA TATATCCCCA CTATGGCATA TACATCTTAG ATCGTCTCGA GAATTTTATG
AAACAAATAG ATATTTGGTA CGCGACGTTA AGTCAGCAAG CGCAAGCGCC ACCGGTGACA
CAATAA
 
Protein sequence
MSFQEQYYEY QDYYPVYDNR APTGIWYIDQ LLQGGFRKGE IYLVAGEAGQ GKTIFSLQFL 
KTGAEIYDEP GLYITIDEPS EDVKRGVKDS LGWDLDILEN QNKLIFVDLR THFRTYAKEE
KVTADPRDIA KIILEYVKKF GIKRLVIDPI APLIITSHTD ILWVREYMRE LVFQLRKIKD
ITTLLTSEIP TGENKISRFG VEEYLASGVI KLELMEYRGF VFRVMFIRKM RWTAVRPQKL
VFEIYPHYGI YILDRLENFM KQIDIWYATL SQQAQAPPVT Q