| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0587 |
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| Symbol | rps28e |
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| ID | 4617607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | + |
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| Start bp | 537687 |
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| End bp | 537920 |
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| Gene Length | 234 bp |
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| Protein Length | 77 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639783677 |
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| Product | 30S ribosomal protein S28e |
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| Protein accession | YP_930108 |
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| Protein GI | 119872101 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2053] Ribosomal protein S28E/S33 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.000175398 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCGAGTG AGGTAAAATT TTCGCCATAT GAAGACGCCG TTGCGGCTCT AGTTATACAA
ATACTTGGAA GAACCGGGGT AGCTGGAGAG GTCACACAAG TCAAAGTAAA AATTCTCGAA
GGCCGTGATA AAGGCCGTAT CTTGACTAGA AATATTAAAG GGCCTGTGAG ACTCGGCGAC
ATAGTGATGT TAAGAGAAAC CGAAAGAGAA GCGCGGAGAA TTACGGCACG ATGA
|
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| Protein sequence | MSSEVKFSPY EDAVAALVIQ ILGRTGVAGE VTQVKVKILE GRDKGRILTR NIKGPVRLGD
IVMLRETERE ARRITAR
|
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