Gene Pisl_0582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0582 
Symbol 
ID4617761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp533028 
End bp533870 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content44% 
IMG OID639783672 
Product5'-methylthioadenosine phosphorylase II 
Protein accessionYP_930103 
Protein GI119872096 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0005] Purine nucleoside phosphorylase 
TIGRFAM ID[TIGR01694] 5'-deoxy-5'-methylthioadenosine phosphorylase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.000568497 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTCATAA AACTCACACA ACCACCTAAA GAGCCAAAAG AGTTGGGGGT CGAGGAATTT 
CCAAGACTAG GAATTATAGG AGGTAGCGGT CTTTACGACC CTGGCATATT TGAAAACGCC
GTGGAGGTAC AAATACATAC GCCATATGGT CTACCCTCTG ACAATGTAAT AATTGGACGT
GTATCAGGAC GTGTCGTCGC CTTTTTGCCC AGACATGGCA GAGGACATAA GTATCCTCCG
CATAAAATAC CTTATCGCGC TAATATATAC GCGCTTTATA CATTAGGAGT TAGGTCTATA
ATAGCCGTAA GTGCTGTCGG CTCTTTAAGA CCTGACTACG CTCCCGGCGA TTTCGTCGTT
CCTGATCAAT TCGTCGATAT GACTAAGTCG CGTGAATACA CATTTTACGA CGGGCCGCGT
ACGTGTCATA TATCAATTGG GCTAGAGCCT TTTACCCAGG AGATTAGAAA AGTTTTAGTA
GAGGTGGCAA GCAGATATAA TAGAACACAT GACGGGGGGT GCTACATATG TATTGAAGGG
CCTCGGTTTA GTACAAAAGC TGAATCTAGA ATATGGCGGG AGGTTTTTGG ATGCGACATA
ATAGGCATGA CTCTTGTGCC GGAGATTAAC TTAGCTAGAG AATTAGGCAT GTGTTATGGC
TTAATCGCCC TTGTGACAGA CTACGATGTG TTAGTTCCTC ACCAACCTGT GACAGCAGAG
GCTGTAGAAA AAATGATGAC CGAAAAAATC GACATTATAA AAAGAGTTAT TGCAGAGGCC
GTACCAAGAA TTCCGGCAGA AATTCCCAAA TGCGGCGATG TATTGAAATA TGCCTGTGTC
TAA
 
Protein sequence
MVIKLTQPPK EPKELGVEEF PRLGIIGGSG LYDPGIFENA VEVQIHTPYG LPSDNVIIGR 
VSGRVVAFLP RHGRGHKYPP HKIPYRANIY ALYTLGVRSI IAVSAVGSLR PDYAPGDFVV
PDQFVDMTKS REYTFYDGPR TCHISIGLEP FTQEIRKVLV EVASRYNRTH DGGCYICIEG
PRFSTKAESR IWREVFGCDI IGMTLVPEIN LARELGMCYG LIALVTDYDV LVPHQPVTAE
AVEKMMTEKI DIIKRVIAEA VPRIPAEIPK CGDVLKYACV