| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0581 |
|---|
| Symbol | |
|---|
| ID | 4617552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 532599 |
|---|
| End bp | 532997 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639783671 |
|---|
| Product | translation initiation factor IF-5A |
|---|
| Protein accession | YP_930102 |
|---|
| Protein GI | 119872095 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
|---|
| TIGRFAM ID | [TIGR00037] translation initiation factor eIF-5A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.00138219 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACTA AGTACGTTGA GGTAGGAGAG CTAAAGGAGG GCTCCTATGT GGTAATAGAT
GGAGAGCCTT GTAGAGTTGT AGAGATAGAG AAGTCTAAAA CGGGGAAACA CGGTAGCGCG
AAAGCGCGAA TCGTTGCCAT CGGCGTTTTT GATGGTGGAA AAAGGACTTT AAGTCTCCCG
GTGGACGCCC AGATAGAGGT GCCTATTATT GAGAAGTTCA CGGCACAAGT GCTTTCGATC
TCTGGCAACG TTATTCAACT GATGGATATG CGAGACTATA AGACTATCGA AGTTCCCATA
GATTACGTTG AGGAAGAGGC TAAGGGGAGG TTAGCGCCGG GAGTTGAGGT AGAGGTGTGG
CAGATATTAA ATCGATATAA GATAACTCGA GTGAAATAA
|
|---|
| Protein sequence | MSTKYVEVGE LKEGSYVVID GEPCRVVEIE KSKTGKHGSA KARIVAIGVF DGGKRTLSLP
VDAQIEVPII EKFTAQVLSI SGNVIQLMDM RDYKTIEVPI DYVEEEAKGR LAPGVEVEVW
QILNRYKITR VK
|
|---|
| |