Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0579 |
Symbol | |
ID | 4616335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 531151 |
End bp | 531486 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639783669 |
Product | RNA polymerase Rpb4 |
Protein accession | YP_930100 |
Protein GI | 119872093 |
COG category | [S] Function unknown |
COG ID | [COG1460] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.952772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.00157455 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGCATTA AGAAAATACG CAAATCGGAG GAGATAACTA ATGCTAAGGC ATTGGAAATA CTAAGGACGT TGTCTACTAC AACTCAACTT TCAGAAGACC AGAGAAAAAC GCTTGACTAT TTAGAAAAGG TAACAAAGAG AAAGCCTGAC GAGGCAGAGT CTATAGTGAA AAAGCTAATT GAAAAATTTG GATTCACACG TATTACAGCA GTTCAGTTAA CAAATCTGTC TATAGAAAGC TTAGATGAGT TAAAACTTAT ACTCTCATAT CTTGAGAAAA GGGAGTATTC AGATAGTGAG CTAAAGGAAA TATACAAGAT ACTAACTGGG CAATGA
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Protein sequence | MSIKKIRKSE EITNAKALEI LRTLSTTTQL SEDQRKTLDY LEKVTKRKPD EAESIVKKLI EKFGFTRITA VQLTNLSIES LDELKLILSY LEKREYSDSE LKEIYKILTG Q
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