Gene Pisl_0579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0579 
Symbol 
ID4616335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp531151 
End bp531486 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content35% 
IMG OID639783669 
ProductRNA polymerase Rpb4 
Protein accessionYP_930100 
Protein GI119872093 
COG category[S] Function unknown 
COG ID[COG1460] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.952772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.00157455 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCATTA AGAAAATACG CAAATCGGAG GAGATAACTA ATGCTAAGGC ATTGGAAATA 
CTAAGGACGT TGTCTACTAC AACTCAACTT TCAGAAGACC AGAGAAAAAC GCTTGACTAT
TTAGAAAAGG TAACAAAGAG AAAGCCTGAC GAGGCAGAGT CTATAGTGAA AAAGCTAATT
GAAAAATTTG GATTCACACG TATTACAGCA GTTCAGTTAA CAAATCTGTC TATAGAAAGC
TTAGATGAGT TAAAACTTAT ACTCTCATAT CTTGAGAAAA GGGAGTATTC AGATAGTGAG
CTAAAGGAAA TATACAAGAT ACTAACTGGG CAATGA
 
Protein sequence
MSIKKIRKSE EITNAKALEI LRTLSTTTQL SEDQRKTLDY LEKVTKRKPD EAESIVKKLI 
EKFGFTRITA VQLTNLSIES LDELKLILSY LEKREYSDSE LKEIYKILTG Q