Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0578 |
Symbol | |
ID | 4616331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 530770 |
End bp | 531072 |
Gene Length | 303 bp |
Protein Length | 100 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639783668 |
Product | 50S ribosomal protein L21e |
Protein accession | YP_930099 |
Protein GI | 119872092 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2139] Ribosomal protein L21E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.00254948 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTTAAGA GAACACATGG CTATCGTTAC AAGAGCAGAA AGTTATTAAG AAAGAAACCT AGAGAAAGAG GACTCTCCGG ACTTTCCCGC CTTTTATATG AATACAAACC TGGCGATAGA GTTGTAATAG ATATAGATCC GACCTTTGTG GAAAATGCGC CGCATAGACG TTACCAGGGG AAGGTTGGCG TTGTGATCGG TACTAGGGGT AGAGCGTATG TTATAGAGAC CTATTTAGGA GATAAGAAGA AGATTCTTGT AGTAACTCCT GAGCACCTCA AGCCTCATCA GGGAGGTAGC TGA
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Protein sequence | MVKRTHGYRY KSRKLLRKKP RERGLSGLSR LLYEYKPGDR VVIDIDPTFV ENAPHRRYQG KVGVVIGTRG RAYVIETYLG DKKKILVVTP EHLKPHQGGS
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