Gene Pisl_0578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0578 
Symbol 
ID4616331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp530770 
End bp531072 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content44% 
IMG OID639783668 
Product50S ribosomal protein L21e 
Protein accessionYP_930099 
Protein GI119872092 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2139] Ribosomal protein L21E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.00254948 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTAAGA GAACACATGG CTATCGTTAC AAGAGCAGAA AGTTATTAAG AAAGAAACCT 
AGAGAAAGAG GACTCTCCGG ACTTTCCCGC CTTTTATATG AATACAAACC TGGCGATAGA
GTTGTAATAG ATATAGATCC GACCTTTGTG GAAAATGCGC CGCATAGACG TTACCAGGGG
AAGGTTGGCG TTGTGATCGG TACTAGGGGT AGAGCGTATG TTATAGAGAC CTATTTAGGA
GATAAGAAGA AGATTCTTGT AGTAACTCCT GAGCACCTCA AGCCTCATCA GGGAGGTAGC
TGA
 
Protein sequence
MVKRTHGYRY KSRKLLRKKP RERGLSGLSR LLYEYKPGDR VVIDIDPTFV ENAPHRRYQG 
KVGVVIGTRG RAYVIETYLG DKKKILVVTP EHLKPHQGGS