Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0568 |
Symbol | |
ID | 4617532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 524149 |
End bp | 524943 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639783658 |
Product | hypothetical protein |
Protein accession | YP_930089 |
Protein GI | 119872082 |
COG category | [S] Function unknown |
COG ID | [COG1578] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.108249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.00320219 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGTGGATTG ACGAAGTTAA TTGTAAGCTC TGTATAATTT CATCAAGGAC CAGCGATTTA GTAAGGCTTA ATAGACCTGA AAAACTCCCT GAGATTCTAA GCGAACTCTC CCGTCTATTG CAAAAGTCTA GCAGAAGTGA AGCATTTTCC GAGAGCTTTA GATCTGTAGC TAAGCTTGTC GGCGTAGAGG ATCCCTATAG AGAATATAAG GAGAGACTAG CTACAATAGG CAAAAAAGTT GCGGAGATCG TGAGACACAA ACTTCAACAA ACTTCATGGG ATTTAAAAAC TGCCCTCAGA ATAGCGGCTG CGGCGAATAT CGTTGATACA AGCGTATTGG GCTATAGACC TAAGAAACTA GAGGAAGCCA TATGGGATTT GCCAGCAATA GAAGAGTACG TAGAGTTACC CTCTGAATTA TATTATGTGC TTGATAATGC AGGAGAGGCG CAAATAGACT TTGTTGTAGC TGAGGCATTA GAGAGAAATG GTATTAAACC CATATTTGTC GTCCGTTCGG AACCTTATGA AATAGACATG ACAGAAAGCG ATCTGGCAGG ATACAGGGTG ATAGCTACGC CCGGCAATAT ATCTCCCATC AGATGGATAA GAGATAGATT CATAATAGCG AAGGGTATTG CCAATTTTGA GGCATATATA GAATGGGGAG AGGTACCAGC GCTTCTATTG TTCAGGGCAA AGTGTGATGT ACTCTCCAGG GTATTTTCAG TCCCTAGAAA TTCGCCTATT ATTATCAGCG GCGAGAAGGC TAAGGCTATT AGCCTAGCAC AATAA
|
Protein sequence | MWIDEVNCKL CIISSRTSDL VRLNRPEKLP EILSELSRLL QKSSRSEAFS ESFRSVAKLV GVEDPYREYK ERLATIGKKV AEIVRHKLQQ TSWDLKTALR IAAAANIVDT SVLGYRPKKL EEAIWDLPAI EEYVELPSEL YYVLDNAGEA QIDFVVAEAL ERNGIKPIFV VRSEPYEIDM TESDLAGYRV IATPGNISPI RWIRDRFIIA KGIANFEAYI EWGEVPALLL FRAKCDVLSR VFSVPRNSPI IISGEKAKAI SLAQ
|
| |