Gene Pisl_0568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0568 
Symbol 
ID4617532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp524149 
End bp524943 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content42% 
IMG OID639783658 
Producthypothetical protein 
Protein accessionYP_930089 
Protein GI119872082 
COG category[S] Function unknown 
COG ID[COG1578] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.108249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.00320219 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTGGATTG ACGAAGTTAA TTGTAAGCTC TGTATAATTT CATCAAGGAC CAGCGATTTA 
GTAAGGCTTA ATAGACCTGA AAAACTCCCT GAGATTCTAA GCGAACTCTC CCGTCTATTG
CAAAAGTCTA GCAGAAGTGA AGCATTTTCC GAGAGCTTTA GATCTGTAGC TAAGCTTGTC
GGCGTAGAGG ATCCCTATAG AGAATATAAG GAGAGACTAG CTACAATAGG CAAAAAAGTT
GCGGAGATCG TGAGACACAA ACTTCAACAA ACTTCATGGG ATTTAAAAAC TGCCCTCAGA
ATAGCGGCTG CGGCGAATAT CGTTGATACA AGCGTATTGG GCTATAGACC TAAGAAACTA
GAGGAAGCCA TATGGGATTT GCCAGCAATA GAAGAGTACG TAGAGTTACC CTCTGAATTA
TATTATGTGC TTGATAATGC AGGAGAGGCG CAAATAGACT TTGTTGTAGC TGAGGCATTA
GAGAGAAATG GTATTAAACC CATATTTGTC GTCCGTTCGG AACCTTATGA AATAGACATG
ACAGAAAGCG ATCTGGCAGG ATACAGGGTG ATAGCTACGC CCGGCAATAT ATCTCCCATC
AGATGGATAA GAGATAGATT CATAATAGCG AAGGGTATTG CCAATTTTGA GGCATATATA
GAATGGGGAG AGGTACCAGC GCTTCTATTG TTCAGGGCAA AGTGTGATGT ACTCTCCAGG
GTATTTTCAG TCCCTAGAAA TTCGCCTATT ATTATCAGCG GCGAGAAGGC TAAGGCTATT
AGCCTAGCAC AATAA
 
Protein sequence
MWIDEVNCKL CIISSRTSDL VRLNRPEKLP EILSELSRLL QKSSRSEAFS ESFRSVAKLV 
GVEDPYREYK ERLATIGKKV AEIVRHKLQQ TSWDLKTALR IAAAANIVDT SVLGYRPKKL
EEAIWDLPAI EEYVELPSEL YYVLDNAGEA QIDFVVAEAL ERNGIKPIFV VRSEPYEIDM
TESDLAGYRV IATPGNISPI RWIRDRFIIA KGIANFEAYI EWGEVPALLL FRAKCDVLSR
VFSVPRNSPI IISGEKAKAI SLAQ