Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0566 |
Symbol | |
ID | 4617524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 522229 |
End bp | 523152 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639783656 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
Protein accession | YP_930087 |
Protein GI | 119872080 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.132391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.00110885 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTAGCAC TTATCGTAGA CAATGTCGAT TTACTCATAA AAGAAAGGCT AGAGAAAATT GGAATAAAAG TTGATATAAA ACCAGGTATT TCAAGAGAGC AGTTATTAAA TATAATAGGA GACTATGATA TTTTAATTTT TAGGGGAAGG CTAAGAATAG ATCGAGAGAT TATTGATGCA GGCACAAATT TGAAAATTTT AGCAAGATAT GGCGTTGGGT TAGATAACGT AGATGTTGAA TATGCTGTAA AAAGGGGTAT TGCAGTTGTT AGCGCCCCTC GCGCACCTAC ACAGAGCGTC GCCGAATTAA CGATAGGTCT TATGCTTGCA GTCGCCCGTA GAATTCCGTT GCTGAATGCC AAGGTAAAGG AGGGCGAGTG GCCTAAAGGC AAATATATAG GTATTGAACT AAGCGGAAAA ACTCTTGGTG TCTTAGGATT TGGTAGAATA GGTAGGGCTG TAGCTCAAAT AGCTAAGGGC TTAGGTATGA AAATTCTAGC AAGTGACATA GTAGATGTAA GTTCCGACGT GGAGAAACTG GGAGGTAGAC AAGTGTCGCT ACAAGAGCTT CTAAAAGAAA GCGATGTATT GTCTATCCAT GTACCTCTAA CACCGGACAC ATATAGATTA ATTAATGCCG ATAGACTCGC TTTAGTAAAA GATAATGCCA TATTGATAAA CACAAGCCGG GGTGAGGTCG TTGATCATGA AGCGTTACTA CAACACATAG ATAGACTATG GGGCGTTGGC CTAGACGTTT TACCAGAGGA ACCCCCCAAA AGCCCCTATC TGAGAAAATT GATAACACAC GAAAAAGTTG TAATAACGCC ACATGTAGGT TCCGAGACTT ATGAAGCAAT GAGAAGACTA GCCGAGGAGC TTGTGTTAAA CATAGAAGAA GTGGTCTCGA GAATAAGGCT ATGA
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Protein sequence | MLALIVDNVD LLIKERLEKI GIKVDIKPGI SREQLLNIIG DYDILIFRGR LRIDREIIDA GTNLKILARY GVGLDNVDVE YAVKRGIAVV SAPRAPTQSV AELTIGLMLA VARRIPLLNA KVKEGEWPKG KYIGIELSGK TLGVLGFGRI GRAVAQIAKG LGMKILASDI VDVSSDVEKL GGRQVSLQEL LKESDVLSIH VPLTPDTYRL INADRLALVK DNAILINTSR GEVVDHEALL QHIDRLWGVG LDVLPEEPPK SPYLRKLITH EKVVITPHVG SETYEAMRRL AEELVLNIEE VVSRIRL
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