| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0562 |
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| Symbol | |
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| ID | 4617515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | - |
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| Start bp | 518471 |
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| End bp | 519442 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639783652 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_930083 |
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| Protein GI | 119872076 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
[COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.00149525 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGTTGT TAGAAGTTAA AGAACTTAAG ACATGGTTTC CTGTAAAAAG GGGACTTTTT
AGCCCTGTGA GATATGTGAA AGCGGTAGAT GGAGTTAGCT TCTCAATGGA AAAAGGCGAG
GTTTTAGCAG TGATTGGAGA GTCGGGATCT GGAAAGACTA CACTAGGAAG GACAATTTTG
AGACTTATAA AGCCCACCTC TGGCAGGATA GTATTTGAAG GCAAAGATGT TACGTATCTT
CCAGAGTCTG AACTTAGGTG GTATAGATTT TCAACCGCAA TGGTGTTTCA AGACCCCTTC
AGTTCTTTAA ACCCATATCA TACAGTACAG TATATACTAG AGGAGCCGCT TATACTCAGA
GGCGTAGATC CCAAAGAGAG GTATGAATTT GTCATAAAAG CTCTAGAGGA GGTAAAACTT
GTACCGCCTG AAGACTTCCT CAGAAAATAT CCACACATGT TGAGCGGCGG TCAGAGACAG
CGTGTGGGTA TTGCGAGAGC GCTTATTACA AGACCCAAGT TTATTGTTGC CGACGAGCCC
GTCTCAATGC TCGACGTATC TATTAGAGCA GAGATACTTT CTCTCATGCG ATCCTTACAG
ACTAAATACG GCATTACAAT GATGTACATT ACCCACGATA TAGCCACTGC GAAATATTTA
TCTGACAAAA TATTAGTTAT GTATGCTGGA AAGGTTGTAG AGTATGGTAG ATTTAGAGAT
GTTATAAAGG AGCCTTTACA TCCATATACT CAAGCTCTAA TAGAGGCTCT GCCTGATCCA
GATCCCTCTA ATAGATTTAA GGTTAGAAAA GTGCCGCCTG GCGAGCCGCC TAGTTTGTTA
AATCCGCCGT CTGGCTGTCG TTTTCATCCT CGATGTCCCT ATGCGATAAA AGGCAAATGC
GACAAAGAAG AACCCAAATT AATAGAGGTG AAGAGCGGAC ATTACGTAGC TTGTTGGCTG
TATAATAAAT AA
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| Protein sequence | MSLLEVKELK TWFPVKRGLF SPVRYVKAVD GVSFSMEKGE VLAVIGESGS GKTTLGRTIL
RLIKPTSGRI VFEGKDVTYL PESELRWYRF STAMVFQDPF SSLNPYHTVQ YILEEPLILR
GVDPKERYEF VIKALEEVKL VPPEDFLRKY PHMLSGGQRQ RVGIARALIT RPKFIVADEP
VSMLDVSIRA EILSLMRSLQ TKYGITMMYI THDIATAKYL SDKILVMYAG KVVEYGRFRD
VIKEPLHPYT QALIEALPDP DPSNRFKVRK VPPGEPPSLL NPPSGCRFHP RCPYAIKGKC
DKEEPKLIEV KSGHYVACWL YNK
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