Gene Pisl_0561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0561 
Symbol 
ID4617508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp518019 
End bp518447 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content43% 
IMG OID639783651 
Producthypothetical protein 
Protein accessionYP_930082 
Protein GI119872075 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.00103615 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGAATTG AAAGAACAGG CCAGCCTGTC TCGAAACTTC TACAACTTCT TGAAGAAGAC 
TTAAAGCGAG AAGATATAAT ATATCTTGAG AGGGTGCCAT CTCCTAAGGC TAACGAGAGA
TATCGGGATG TAGTATCACG GTTTTTTACA GAATTTGGCA TAGCTACTGT ATACATTAAA
GTCAGAGGGT CTACGTTTGA AAGACGGTAT GTGATAAATG CAAAATACGA TTGGGCAGTA
GGGGGCGTTG TAGAGGGGTG GGTTGTGGAG GGCGACGTCG TGCGAGTGTA TGAACCTATA
GCCATTAGCC TAAGTGATAT AGGAAAAGCT CTTGATTACT ACGGAGATGC GTATTGGAAA
GCCGAGGAGA GAATCTTATC GAAGAAGATG GCTGAGGTTT ATACAGAAGA GAAGCCTCCT
GCTGATTAA
 
Protein sequence
MRIERTGQPV SKLLQLLEED LKREDIIYLE RVPSPKANER YRDVVSRFFT EFGIATVYIK 
VRGSTFERRY VINAKYDWAV GGVVEGWVVE GDVVRVYEPI AISLSDIGKA LDYYGDAYWK
AEERILSKKM AEVYTEEKPP AD