Gene Pisl_0557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0557 
Symbol 
ID4617452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp514952 
End bp515224 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content43% 
IMG OID639783647 
Producthypothetical protein 
Protein accessionYP_930078 
Protein GI119872071 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0016237 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCCGGTTG TAAGAGGGCC GTCGCTGTTG GCGAAGATTC TTGGATGCCC GACTCAGTGC 
GATTGCGATG TGGTTATACA CGTCAACGAC TTAGACAAAA TCAAGGAGAG GAAGTGCGTG
TGGAGTGTGG AAGATAGTTC CTTTATCCAT AGGCATATAT GGATAGGCGG TTATCCGCAT
ATATCTCTTG AAGATATGGA AAAGATAAAG GAGAGAGAGG TCTTGGATGT AATTAACTGC
ATAAAACTAA AGATGAATTT CGTGGATTTT TAG
 
Protein sequence
MPVVRGPSLL AKILGCPTQC DCDVVIHVND LDKIKERKCV WSVEDSSFIH RHIWIGGYPH 
ISLEDMEKIK EREVLDVINC IKLKMNFVDF