| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0554 |
|---|
| Symbol | |
|---|
| ID | 4617163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 512197 |
|---|
| End bp | 513840 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639783644 |
|---|
| Product | acetolactate synthase, large subunit, biosynthetic type |
|---|
| Protein accession | YP_930075 |
|---|
| Protein GI | 119872068 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.00325179 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACGTTAT ATGATGCATT ATACGACCAA GAGATAGAGC CTATCCTATT TCGCCACGAA
CAAGGCGCAA TGCACGCGGC AGAAGGCTAT GCTAGAGTTT CAGGGAAGCC GGCTGTTGTA
GCTGTTACAA GCGGTCCAGG GGCTACAAAC GTCGTGACTG GGCTAACCAA CGCATATATG
GACTCTACGC CTCTAGTAGT AATCACGGGA CAGGTAGCTA CAAACATATT TGGGAGAGAC
GGATTCCAAG AAACAGATAT CCTAGGCGTG GTAACTCCAA TTACAAAATT TGTATACCAG
GTTAGAAAAC CCTCAGAAGC TTCTTCAGCG TTTAAAACAG CCTATGAGAT TTCAATCTTA
GGAAGACCTG GGCCTACATT AATAGATCTC CCCAGAGATA TCCAAATTGC CCCTGCACCC
GATTACGAGG ATAAAATCGT TGTAAATAGA GAGAAGTTTA TACCGCCTCC GCCAGATGTA
GATAAAACTA GACTTGCAGC TAAATATCTA TCGGAGGCCG AAAGACCAGT AATTCTTGTA
GGAGGCGGCG TGTTGTGGTC AGGCGCCACT CCAGAGGTTT TAGAGCTTGC AAAAACTCTA
TACGCGCCCA TCGTTTCTAC TCTACCTGGC AAAGCGGCAA TACCCCACGA CTTTCCGCTA
TACATGGGAC CCGCCGGTAT GCATGGCCGG GCTGAGGCCG ATGCCGCGTT AGCAAATGCA
GATGTCATAT TAGCAGTGGG CACTAGATTT AGCGATAGGA CGTGGGGACG TTTCAAAGAG
TTGATAGAAT ATGTAAAGAG CGGCAGAATT AAGCTAATCC ATATTGATAT AGATAAAAGC
GAGATAGGTA AAAATGTAAA ACCAACTATA GGCATAGTAG GAGATGCAAA AGAAACACTA
AGACTACTAC TAGACTACAT ACACGTATCA AGTTTTAGAA ATCAGAAATT TATAGATTGG
CTCCTAGAAA TTCGAAAAAA ATATGAAGAA ACCATGGCTA AGATATCGGC GTCAACGCCG
GCATTTCATC CGTGGAAGGC GTTGAAAATC CTAAGGGCCG CGGCTCCTAG AGATACGATT
ACTGTCACTG GCGTTGGCTC GCATCAGATG TGGGCAGAAA TTGTATGGGA CGTCTATGAA
CCTGGGACAT TTATAACATC CGCTGGGCTA GGCACAATGG GCTTCTGCGT CCCGGCCGCG
TTAGGAGCTA AACTAGCCGC AAGAGAGAGA CCTGTCTTGT GTATTGACGG AGATGGATCC
TTCCAGATGA CTATGAACAA TCTAGCTCTC GTAAGAGATT ATAACTTGCC CATAGTGGTC
GTAATTTTTG ACAACAGAGC TTTGCAGTTA GTTAAACAAT GGCAGATATA CCTATACCAG
AGGAGAATAA TTGCGACTGA GTTTAGCAAG AGGCCCGACT TCTTAAAGAT AGCAGAGGCG
TACGATATAG ATGCAATTAG GCCAGAGAGT TACGAACAGC TAGAGAAAGC TGTGGCAAAA
GCGTTGAGAA ATAACGAACC TTTGATAGTG GACTTGACGA TTGATAGCGA ATACGACATA
GTGCTACCGT GGGTTAAGCC TGGCGATTGG TTAACTTCCG CAATATTACC GCCAGGTATG
GATGTCAAAT TGACGTATGA GTAA
|
|---|
| Protein sequence | MTLYDALYDQ EIEPILFRHE QGAMHAAEGY ARVSGKPAVV AVTSGPGATN VVTGLTNAYM
DSTPLVVITG QVATNIFGRD GFQETDILGV VTPITKFVYQ VRKPSEASSA FKTAYEISIL
GRPGPTLIDL PRDIQIAPAP DYEDKIVVNR EKFIPPPPDV DKTRLAAKYL SEAERPVILV
GGGVLWSGAT PEVLELAKTL YAPIVSTLPG KAAIPHDFPL YMGPAGMHGR AEADAALANA
DVILAVGTRF SDRTWGRFKE LIEYVKSGRI KLIHIDIDKS EIGKNVKPTI GIVGDAKETL
RLLLDYIHVS SFRNQKFIDW LLEIRKKYEE TMAKISASTP AFHPWKALKI LRAAAPRDTI
TVTGVGSHQM WAEIVWDVYE PGTFITSAGL GTMGFCVPAA LGAKLAARER PVLCIDGDGS
FQMTMNNLAL VRDYNLPIVV VIFDNRALQL VKQWQIYLYQ RRIIATEFSK RPDFLKIAEA
YDIDAIRPES YEQLEKAVAK ALRNNEPLIV DLTIDSEYDI VLPWVKPGDW LTSAILPPGM
DVKLTYE
|
|---|
| |