| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0537 |
|---|
| Symbol | |
|---|
| ID | 4618309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | + |
|---|
| Start bp | 501612 |
|---|
| End bp | 502133 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639783627 |
|---|
| Product | heat shock protein Hsp20 |
|---|
| Protein accession | YP_930058 |
|---|
| Protein GI | 119872051 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.0220395 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATTT TTGATGAATT TGAGAAATTC ATGAGGAGAT GGCAGAAATT CTTTGAAGAG
ATAGAGAGAC AAATAGAGGA AGACTTTAGA AGATTTTCTT CACAAGTTGG CGGTGGGAGA
CCACGCTACT ATTACTATGG CTTTGAAATT ACTGTGGGAC CCGACGGAAG ACCCGTAGTT
AGAGAATTTG GAAATGTAAG GAGAAGACCT GATGTCGAAC GTATAGAGGT CGTAGATGAG
ATTGATCCGC TTACGGACAT AGTAGAGGAG GACGACAAGA TAAAGGTTGT TGTAGACATG
CCAGGGGTAG AGAAGGAGGA TATAAAGCTC TACATAAGCG AAGACGGGAA GACGTTAACA
ATAGACGCTA GGGGTAAGGA GAGGAAGTAC CATAAGGAGA TCAGGTTGCC AGCCGCCGTA
GATCCAAACA AGGCCAAGGC GACGTATAAA AACGGTGTTC TCTCCGTAGA GCTAGAGAAG
GTAGAGAAGA AAAAAAGAGG GTTTGAGATA AAGATCGACT AA
|
|---|
| Protein sequence | MSIFDEFEKF MRRWQKFFEE IERQIEEDFR RFSSQVGGGR PRYYYYGFEI TVGPDGRPVV
REFGNVRRRP DVERIEVVDE IDPLTDIVEE DDKIKVVVDM PGVEKEDIKL YISEDGKTLT
IDARGKERKY HKEIRLPAAV DPNKAKATYK NGVLSVELEK VEKKKRGFEI KID
|
|---|
| |