| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0536 |
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| Symbol | |
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| ID | 4617345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | + |
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| Start bp | 499363 |
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| End bp | 501579 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639783626 |
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| Product | AAA family ATPase, CDC48 subfamily protein |
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| Protein accession | YP_930057 |
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| Protein GI | 119872050 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.033227 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAGTG AGATTACTCT GAAAGTTGCC GAAGCTAGGT CGCGCGATGT TGGTAGAAGT
ATTGTTAGAA TCCCTGTGCG TATAATGAGG AAACTCGGCA TAGAGCCTGG CGATTATGTA
GAAATCGTTG GTAGAAAGTC GGCCTACGCC CAAGTGTGGC CGGCGTATCC GGAGGACGAG
GATAAGGACG TCATTAGGAT GGACGGCATC ATTAGACAGA ACGCCGGCGT TGGCATTGGA
GATACTGTAA AAGTTAGAAA GGCAGTCTTA AAATCTGCCC AGAGGGTGGT CTTAGCGCCC
ACAGAGCCTG TCAGAGTAGA CCCGGAGTAT CTAAAGAAAC AGATACTCCT TGGCAAACCA
GTGGCCAGGG GACAGGCGAT AGACGTACCT TTCTACGGCG GCGCTATTAG ATTCGTCGTG
GTGCAAGTGC AGCCCGGCCC AGCGGCCTAC GTCTCTATAG ACACAGAGGT CACAGTACGC
GAAGAGCCTG TAAAAGAGAC AGAGCTCTCC ATTCCGAGGG TCACTTGGGA GGATATTGGT
GATTTGGAGG ATGCTAAACA GAAGATTCGT GAGCTTGTGG AGCTTCCTCT TAGGCATCCT
GAGTTGTTTA AACATTTGGG TATTGAGCCT CCGAAGGGTA TCCTCTTGAT TGGCCCCCCT
GGCACGGGCA AGACTCTCCT CGCCAAGGCT GTGGCTAACG AGGCCAACGC CTACTTCGTC
GCTATAAACG GCCCCGAGAT CATGTCGAAG TACTACGGCG AGTCTGAGGC GCGGCTTAGG
GAGATTTTCG AAGAGGCGAA GAAAAACGCC CCCGCCATAA TCTTCATAGA CGAGATAGAC
GCCATAGCCC CCAAACGCGA GGAAGTCACG GGAGAGGTAG AAAAGCGAGT GGTGGCACAA
CTACTAACCC TAATGGACGG ACTACAAGAG AGAGGACAAG TAATAGTAAT AGGAGCAACC
AACCGCCCAG ACGCAATAGA CCCAGCACTA AGAAGACCAG GAAGATTCGA CAGAGAAATC
CACATACCTA TGCCAGACAA GAGAGCTAGA CGTGAAATTC TGGCGGTGCA TACACGCAAT
ATGCCGTTAT GTACAAAAGC CGATGTTGAG AGTGGGATTT GTGCGCCAGG TGACGAGGTT
GACCTAGATA AAATTGCCGA GATGACCCAC GGCTACACCG GCGCGGATCT CGCGGCGCTT
GCAAAAGAGG CCGCCATGGC GGCGTTAAGA AAGGCTATGA ACAAGGGCAT AATTAATATT
GAACAAGACG TCATACCACA AGAGGTATTA AATAAGTTAA AGGTAGGTAT GTCTGACTTT
TTAGAAGCTA TGAAATATGT ACACCCAACA GTACTAAGGG AGGTAATCAT TGAGGTTCCC
GAGGTGCATT GGGACGACAT CGGGGGATAC GACACTATAA AACAGGAGCT GAGAGAGATC
GTAGAGTGGC CTATGAAGTA CAAACACTAC TTCGACGAGT TGGGAGTCGA GCCGCCGAAG
GGAATCCTCC TCTTTGGGCC GCCCGGCGTG GGGAAGACAC TATTTGCAAA AGCAGTGGCC
ACGGAATCGG GCGCTAACTT CATCGCCGTC AGAGGCCCCG AGCTTCTCTC AAAGTGGGTC
GGCGAGTCTG AGAAAGCCAT ACGTGAGATC TTTAAGAAAG CCCGCATGGC TGCTCCCTGC
GTTATATTCT TTGATGAGAT AGACTCAATA GCGCCTGCGA GAGGCTCCAG ACTTGGTGAT
TCTGGAGTCA CAGATAGAAT GGTCAATCAG CTACTCGCCG AGATGGACGG AATAGGCACG
CTCAAAAACG TGGTCGTCAT GGCTGCCACC AATAGACCTG ATATTTTAGA TCCGGCATTA
TTAAGGCCGG GCCGTTTTGA TCGAATAATC TACGTCCCAC CGCCTGATTT AAAGGCGAGG
ATAGAAATAC TGAAGGTCCA TACAAGAAAG ATCAAGTTAG GAGATGATGT AAATCTGGAG
GAGTTAGCAA AGAAAACCGA AGGCTACACC GGCGCAGACC TTGCGGCGCT TGTAAGAGAG
GCGGCAATGC TCGCCCTAAG AGAAACCATA AAAGAGAAAA CGCCAAAGGC AAAACCAGTC
TCATGGAAGC ACTTCGAAGA AGCGCTAAAA AGAATACCAC CATCGCTCAC CCCAGAGGAT
ATAAGACGTT ACGAGGAAAT GGCGAAAAGA ATTAAACGTG CTGTTGTTGG TCTATAA
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| Protein sequence | MSSEITLKVA EARSRDVGRS IVRIPVRIMR KLGIEPGDYV EIVGRKSAYA QVWPAYPEDE
DKDVIRMDGI IRQNAGVGIG DTVKVRKAVL KSAQRVVLAP TEPVRVDPEY LKKQILLGKP
VARGQAIDVP FYGGAIRFVV VQVQPGPAAY VSIDTEVTVR EEPVKETELS IPRVTWEDIG
DLEDAKQKIR ELVELPLRHP ELFKHLGIEP PKGILLIGPP GTGKTLLAKA VANEANAYFV
AINGPEIMSK YYGESEARLR EIFEEAKKNA PAIIFIDEID AIAPKREEVT GEVEKRVVAQ
LLTLMDGLQE RGQVIVIGAT NRPDAIDPAL RRPGRFDREI HIPMPDKRAR REILAVHTRN
MPLCTKADVE SGICAPGDEV DLDKIAEMTH GYTGADLAAL AKEAAMAALR KAMNKGIINI
EQDVIPQEVL NKLKVGMSDF LEAMKYVHPT VLREVIIEVP EVHWDDIGGY DTIKQELREI
VEWPMKYKHY FDELGVEPPK GILLFGPPGV GKTLFAKAVA TESGANFIAV RGPELLSKWV
GESEKAIREI FKKARMAAPC VIFFDEIDSI APARGSRLGD SGVTDRMVNQ LLAEMDGIGT
LKNVVVMAAT NRPDILDPAL LRPGRFDRII YVPPPDLKAR IEILKVHTRK IKLGDDVNLE
ELAKKTEGYT GADLAALVRE AAMLALRETI KEKTPKAKPV SWKHFEEALK RIPPSLTPED
IRRYEEMAKR IKRAVVGL
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