Gene Pisl_0535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0535 
Symbol 
ID4617175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp497353 
End bp499329 
Gene Length1977 bp 
Protein Length658 aa 
Translation table11 
GC content44% 
IMG OID639783625 
ProductCBS domain-containing protein 
Protein accessionYP_930056 
Protein GI119872049 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.672261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0583682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTAAAGA AAGAAGAAGT TAAAAAAGTC GTGAGGCCCG AAGCCCCTCA ATATGTGAAA 
GACGTTGTTG AACATCCTCC GTTTAGAGTT ACTACAAACA CGACTCTGGA GACTCTCGCC
TCGTATCTGA GAAAATTCCC AATCGACGTA GTGCCTGTGT TTAAATCTAT CTTTTCAGAA
GACGTAGCTG GAGTTGTATA TCCACATACA TCCCTCTTGA TAAAAAGTAA GAAGCTAGAT
GCCAAAATAG GCGATTTCTT AAATCCGCCG ATCGTAGTCA AGGAGAGTTG GAAAATAGAG
AACGTTGCCG AGATTTTAAT AGCGGAATCT AAGTGGGGCG CAGTTGTAGT AGATGAAGAG
GGGAAATACG TCGGAATTGT GACGTTGAGA GGTCTCCTGT CGGCTCTTGC GCTAAAAGAG
CCTAAGGCTA AGTCTGTTGC CGCTATTTAC ACCCCCCTAG GCGAGAAGAA AAGCAGAGCG
GGGTTTGTGA AAGCTATTGA GAGAGTATCT AAAATTTTCA AAAAGCTTGT CGGGGGCGAG
GTAGATGGCT ATGTAGTTCT CAGCAGAGAA AACGGCGCCG TTGGGATTTT GACGATTTGG
GACTTTGTAA AGTCGCGGAG GTGGTACAGA GGCGCAGGCG AGCCCAGGCC GCTATTTGGC
ACTCGCGTGA CTAGAGGCGA GAGTAAGCAC ACGGGAGTTG TAAGAGTGTG GAGAATTATG
TTTAGAGGCG TAGCTGTAGC AACGCCTGAA ACACCTGTGG AAGAGGTGGC GAAGTATATG
GCTACGACTG GGTTATATGT AGTACCAGTC GTCGACAAAG ACCAGAGGGT CATAGGAGCT
GTAACTGTGT GGGACATACT ACATGCATAT TTATATGGGC CTAAAGAGGG GAGGGAGGAT
ATAGAGGTTA GAAAAGCTAT AGAGATAGTT GTTGAAAAAC CGACGTTAGA AACCGCAATA
GGGATTAGGC CGTCTAAACA CGTCACAGGC TTAAGAGCTA GAGACGTAAT GTTAACCGAC
ATACCATCTG TTAATATCAG AGATACGCTT TCGAGAATAC GTAAAGTTTT CCTAAGAAGC
CGCAGTAGTA TAGTCGCTGT ATTAGACGAC GGCGGAAAGA TAGTGGGGTT TATAACTAGG
CGCGACTTCC TTACCTATAT AGCAGAGAAA TCGCTGGGGT ACTGGAAGAG ACAAAAAGGC
AAGATGTTAA TATTGAAGGA ACAGGTGGCG CCAGGTGAGA CGGTGAGAAT ACTAGTTGAG
GAGGGCACTG CCGGAGACAT AATGAAGACA AACTATCCAG TTGTTGCTCC AAATACAACA
GTAGAGGAGA TAGCATATAA GATGTTAGCC GCTGGTACAG ACTATGTAGT AATAGTAGGC
GAAGACAATA CGCCAATTGG CGTAGTGACA AAGGATGAGC TTATAAAGGC GTTTAAAGAG
CGTGGCAGAA AAGCAAAAGT AGGAGAGTTA ATGACGCCGG CGGAAATCGC CACGGTGAAT
TTCTTTGCCA GCTTACACTC TGTGATAAAG AAGATAAATG CATATGAGCT AGATGGTGTT
GTTGTAACAG AGGGTAACGA TATAAAAGGC GTGGTATCTG TAGACGACCT CGCTTTAAGA
CCTATTGAGG AAACGTTAAG AGGCGAGAAA ATCATCTTCT TCACGAAGTC TGGCGTTTTA
AGAAAAGTAT CAACAGGTCT AAGAAGATTG CGCTATTCTA AAGTCGGCAC ATTAATGGCA
TTTGATGTTA TGAGACCCGT AAGTCTAAAC ATCTCTATTA ACAACGACGT AGGCGAAATT
ATAGATAAAT TACTTGAAAA CGGAGTATTG CCGGTGTTTG ATGAACAGGG AAGGTTAGTA
GGTGTTCTTA ATAAAATGGA CATAGTAAAA GACCTTGCCA GGGTGTATAT TACATACGCC
ATGCCTGAGA AAGTTGCAGA GGTAAAAGAG ATGGAACGAG AGATCAAACA GTCTTGA
 
Protein sequence
MLKKEEVKKV VRPEAPQYVK DVVEHPPFRV TTNTTLETLA SYLRKFPIDV VPVFKSIFSE 
DVAGVVYPHT SLLIKSKKLD AKIGDFLNPP IVVKESWKIE NVAEILIAES KWGAVVVDEE
GKYVGIVTLR GLLSALALKE PKAKSVAAIY TPLGEKKSRA GFVKAIERVS KIFKKLVGGE
VDGYVVLSRE NGAVGILTIW DFVKSRRWYR GAGEPRPLFG TRVTRGESKH TGVVRVWRIM
FRGVAVATPE TPVEEVAKYM ATTGLYVVPV VDKDQRVIGA VTVWDILHAY LYGPKEGRED
IEVRKAIEIV VEKPTLETAI GIRPSKHVTG LRARDVMLTD IPSVNIRDTL SRIRKVFLRS
RSSIVAVLDD GGKIVGFITR RDFLTYIAEK SLGYWKRQKG KMLILKEQVA PGETVRILVE
EGTAGDIMKT NYPVVAPNTT VEEIAYKMLA AGTDYVVIVG EDNTPIGVVT KDELIKAFKE
RGRKAKVGEL MTPAEIATVN FFASLHSVIK KINAYELDGV VVTEGNDIKG VVSVDDLALR
PIEETLRGEK IIFFTKSGVL RKVSTGLRRL RYSKVGTLMA FDVMRPVSLN ISINNDVGEI
IDKLLENGVL PVFDEQGRLV GVLNKMDIVK DLARVYITYA MPEKVAEVKE MEREIKQS